Clone FMO10844 Report

Search the DGRC for FMO10844

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:44
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30357-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10844.5prime Sequence

926 bp (923 high quality bases) assembled on 2011-11-17

> FMO10844.5prime
CAGTCGACATGCCCCACACAGACGACACATTTCCGGAAGGCAGTTCTTGT
TGTCCTATTGACATTGTTTCCTCAAATAAAGTCATCCTGCGCGGCTATGC
TTCTAAGGCGAATAAGGATGTCGAAGCGGTGGAGGAGCTAGAAGAGATAC
AGGAGATGAATGATGAGCTAAGGGATTTGTTCATCAATACAACTGCCATC
AATTGCTCGTCCCTTTCTGAACTAAAAATCCAGACTGACGCTTTCAACAC
CCTTAAAGAGCGTACACTATTCTCATTGGGATACTCGACAGCCGGGCTTT
TAAAGAAATCAAAAATCAGTAAGGTTCTAAAAGGGAAGGTCAATTTGTAC
CAACAGATTGTGAGCCTTGTAAAGCAACGTACAAAGACCAATTCAGAGAT
CACCATAGGAAAGACAAGTCATCCCGTGCACCTGATGGTCTTACAGAGCT
TTTCGCGAATGTTTCGCGATATGGGCAATGACCTGAGCGTGGCCCTGCCC
GAAAAGATGATTACGCCACGCTCCTTTGGCCTAATCTACGAATGGATGAT
CGAGGACACGCCAGTCTTGCCGCGCCTCGGTCTCCTAGAGGTTTTCCACG
CTGCCAAATTTATGGAGATTCCACAGTTGGTCAGGCAGTGCAAGTATTGC
CTCGATCATGGATTCACTGAGGACTCCGCTGCGATGCTGTACTTTGAGGC
GAAAATACTGAAACTTGAGGTCATCCATTTGCAATATCTTGAGCGCGTCT
CAAAGTTTTTTCTCACGCTGGTGGCATCGATAGAGTTTTTTGAGACTGCC
GCTGAAATCAATGCTATTGCTCATTCCAATCGGATCTGATAGGCGTGAAT
ACGGAGCTGGAGGTCTTCTGGGCGCCGCTCGGTGGCTAAACCACCTCGGG
CCCTCAAGAAAGGGAAACGTACGGAA

FMO10844.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30357-RA 1525 CG30357-RA 117..1028 9..921 4300 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8720597..8721508 921..9 4225 98.2 Minus
Blast to na_te.dros performed on 2014-11-27 20:36:42 has no hits.

FMO10844.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:37 Download gff for FMO10844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30357-RA 117..1013 9..907 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:15 Download gff for FMO10844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30357-RA 117..1013 9..907 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:08 Download gff for FMO10844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30357-RA 117..1013 9..907 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:08 Download gff for FMO10844.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8720612..8721508 9..907 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:15 Download gff for FMO10844.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4608117..4609013 9..907 98   Minus