FMO10851.5prime Sequence
584 bp (584 high quality bases) assembled on 2011-11-17
> FMO10851.5prime
CAGTCGACATGGCTGAAGTCCTAGAGGAATTCATCACCCTAACGCCCTTG
ACTTGTGTGCAACAATGCAATGCTTTACTAGGCTCAACATCAGGAAAGCC
GAGAAGCTGCTCCGTATTTTTTACACTATTTGGCGTATACTGCGGCGTTC
TCATCTTTCGGGCGTATCGCACATATTCCTCTAAGCAAGAAAGAGACGAG
GAAAAGATAACCGAAGGAGTTACCCTTGAGGCTAAGGAGGAAGATTTGAT
CATAGGACCTGGTTCCAGTCTTGTGAACGAATATGTAGAACAAACGAAGC
CGATTCTGTTGCAACCCGTCGGTTTTTCCAGTACTGACATGAGATGGCGC
TATTGCAACCACTTGCCGGAAGCAGAATTAGCACAAGGCTCTGATAGTGA
AAACAGATCAACCGAAAGAGATGACATTGATAACCTCGAAATGATGTGCA
ATGTTGTGGATGATAATGATGCGCAGAAGCCAGTTGCATCCACATCGATG
GCAACGGCTCGGGCGCCTGAGGATAACGCCGATGGTGAGCACGTCGAGCC
CACACCATTTTCGGTGGCAAGCTTTCTAGACCAT
FMO10851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30355-RA | 751 | CG30355-RA | 121..683 | 4..566 | 2740 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:37:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8679494..8679833 | 343..4 | 1685 | 99.7 | Minus |
| 2R | 25286936 | 2R | 8679214..8679438 | 566..342 | 1065 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:37:32 has no hits.
FMO10851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:41 Download gff for
FMO10851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30355-RA | 113..682 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:37 Download gff for
FMO10851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30355-RA | 118..687 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:30 Download gff for
FMO10851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30355-RA | 118..687 | 1..570 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:30 Download gff for
FMO10851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8679209..8679436 | 344..570 | 97 | <- | Minus |
| 2R | 8679494..8679836 | 1..343 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:37 Download gff for
FMO10851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4566999..4567341 | 1..343 | 99 | | Minus |
| arm_2R | 4566714..4566941 | 344..570 | 97 | <- | Minus |
