Clone FMO10857 Report

Search the DGRC for FMO10857

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:57
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12439-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10857.5prime Sequence

719 bp (719 high quality bases) assembled on 2011-11-17

> FMO10857.5prime
CAGTCGACATGGTCAGCGCAAAAACTATTATAGCTACTGGTGTGCTGAAC
ATCCTGGGCATTTCCTTTTTCGTGGCCCAGCCAAAGGATCGATGCTCGGC
AGCTCCACCCGTTGGAAAGTATATCTTCCTACTAGCTATTCTTCTGCTCT
TTTGGGATTCAGACATGATTCCAAGGAAATTGAAACCGTTTTCCCCACGG
ATTTTTGCCTGCGGAGATCTTTTATTCACGATCTTCTTCACCGAAATAAT
CCTGCTGGTCGGATGGTGTGGCCTCGAGAGGATGACCTATCGATTTATAT
TTTCTGTGTGCCGTGGAAAACCTGGTTGCAATTACGGATTAATGACTTTC
TGCAGCATCTTAGGTGCCGTTGGATCACTATGCATTGTGCTCGAGGTGTT
GACACAGCGGAAGATGAAGAATTTGGTGGGACAGAACAGTGCCGGCTTGC
TTATTCCTCAGGACGCCGGACCAGTGTTCAAATTCATTCATGATGTGCGA
ACCTTTGTGAGGGGCGCCATATACTTTTTCCAATTGACTCGGGAGGAACG
TATTCTATCAGTCCACGCCTTCGAGGCTCAATTGCGCTACAAGAAGGGAC
AGGACGTACAACCTGGTGAACCTGCTGTCCAGGATTCCGGGAATCAAATG
GACGCCGGTAAATCGACGACAGAACCGGAAATCGTCCACGAGTTGTCCCC
GGCAAGCTTTCTAGACCAT

FMO10857.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG12439-RB 868 CG12439-RB 122..814 9..701 3405 99.4 Plus
CG12439-RA 799 CG12439-RA 53..745 9..701 3405 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9077242..9077934 9..701 3405 99.4 Plus
Blast to na_te.dros performed on 2014-11-27 20:38:12 has no hits.

FMO10857.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:44 Download gff for FMO10857.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12439-RA 53..751 9..709 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:57 Download gff for FMO10857.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12439-RA 53..751 9..709 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:45 Download gff for FMO10857.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12439-RA 53..751 9..709 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:45 Download gff for FMO10857.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9077242..9077940 9..709 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:57 Download gff for FMO10857.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9077242..9077940 9..709 98   Plus