Clone FMO10859 Report

Search the DGRC for FMO10859

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:59
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31875-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10859.5prime Sequence

509 bp (509 high quality bases) assembled on 2011-11-17

> FMO10859.5prime
CAGTCGACATGTCGGCACGCAAGGAGAAACGAGACATACATTACTGGCGA
AAACAGGCAGCCACCTTGCCGGATTTTGTGCCGCCGTGGAAGCGGGAACA
GGATTTGCAGCAGCTGCAACATCGAGCCTCGATCCTGTGGTCGCCGCAAC
TGCAGGACCAAGATGACAAGGCTGTTCGCGAATACCTTGACTATGCGGCC
AGTCTCTATGATATCGAGGAGGAGCAGGCGCTGTTCATCCTGCGGCGTCA
CGGATACGACCTGCCCCTGGCACATCGACGTCTGGAGAAGACTGAGACAG
CTCGAGGATGTCGCTACCATCGCTGGAAGGCCGAGGATCTCATCCGTCTT
ACCAAGGCCTTCGAGCAATACGGCACCGACTTCGCAAAGGTACGAAAGGA
GCTACCCCACTTTCCCCTGGCCGAGCTTCGGCTGTACTTCTCCTTCATGT
CCTCGGCGTTGGAGACAGATGACCAACAGGCCATCCATAGAGCAAGCTTT
CTAGACCAT

FMO10859.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:37:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG31875-RB 1179 CG31875-RB 244..731 4..491 2395 99.4 Plus
CG31875-RD 1241 CG31875-RD 311..793 9..491 2385 99.6 Plus
CG31875-RC 1363 CG31875-RC 433..915 9..491 2385 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:37:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9996009..9996491 491..9 2385 99.6 Minus
Blast to na_te.dros performed 2014-11-27 20:37:07
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker4 7359 Stalker4 STALKER4 7359bp 854..962 291..397 108 60.7 Plus

FMO10859.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:39 Download gff for FMO10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31875-RB 137..637 1..500 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:26 Download gff for FMO10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31875-RB 240..740 1..500 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:19 Download gff for FMO10859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31875-RB 240..740 1..500 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:19 Download gff for FMO10859.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9996000..9996494 2..500 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:26 Download gff for FMO10859.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9996000..9996494 2..500 98   Minus