Clone FMO10864 Report

Search the DGRC for FMO10864

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30178-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10864.5prime Sequence

587 bp (587 high quality bases) assembled on 2011-11-17

> FMO10864.5prime
CAGTCGACATGTCCGCTTCAATTTGCTGCAGATGCAACGAGAAGATTTGG
CCACGGGCAGTTTGCAGCTTGGGTAAGACGTACCATCCGCACCACTTCAC
CTGCAAGGAGTGCGGCCTGGTGGTTGATCCTAAACTGTTTTTCGCGGTGG
ACGACGACGTGGTCTGCAGCGAGTGCTATCTGGACAAGCATGCCGCTCGG
TGCTCCGCCTGCCGGACTCCGATCCTAGAGCGCGGCGTGGCTGCTGCGGA
GCGCAAGTGGCACGAAAAGTGTTTCCGGTGCGTGAGCTGCAGCAAGTCGC
TGGTCTCGGCGAGCTTCTTTGAAGTCAACGGATACCTGTTCTGCAAGGCG
CACTTCCGGGAACTGTTTTCGTCCCGCTGCGCAGGCTGTGAGAAGCCAAT
CGATCGTCGAGCCGTGGTCGCGCTGAGCACCAAGTGGCATGCCTTGTGCT
TTAAGTGCCACCACTGCCGCAAAAGGATCAGCGCACGGGAATTCTGGATC
GAGAACGGTCAACCCATTTGCGCAGCCTGCCAAACTGTAGTCCCGAGTCC
CCGAAATTTGTCAGCCCAAGCAAGCTTTCTAGACCAT

FMO10864.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG30178-RA 694 CG30178-RA 106..666 9..569 2760 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23986720..23987280 9..569 2760 99.5 Plus
Blast to na_te.dros performed on 2014-11-27 20:38:45 has no hits.

FMO10864.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:47 Download gff for FMO10864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30178-RA 47..610 9..573 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:12 Download gff for FMO10864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30178-RA 106..669 9..573 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:58 Download gff for FMO10864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30178-RA 106..669 9..573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:58 Download gff for FMO10864.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23986720..23987283 9..573 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:12 Download gff for FMO10864.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19874243..19874806 9..573 99   Plus