Clone FMO10867 Report

Search the DGRC for FMO10867

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31681-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10867.5prime Sequence

456 bp (380 high quality bases) assembled on 2011-11-17

> FMO10867.5prime
CAGTCGACATGTGCTTAAGGCTTTTACTATCTATACTAGTATCAATTGCT
GGCCTGGCTTGTGCTGCTCGAATTCCTGGGCCAGAGGAACGGATTGTCGG
AGGTTCATACATCCCCATCGAATATGTTCCTTGGCAAGTGTCGGTGCAAA
ATAATTCGTTACATTGCTGTGGTGGAGTCATCTACAGTGATCGAGCTATT
TTGACTGCCGCTCATTGCCTTTCTAATGTAACTGTGACGGATCTATCAGT
TCGCGCTGGATCTTCGTATTGGAGCAAAGGTGGTCAGGTGTTAAAGGTGC
TAAAGACAATTGCACATCCAAAATACGTGCCTAAACTTTACAATCCGTAT
GATATTGCTGTGCTAATTTTGGAGGCCCTCTCAAACTTGGTGGCACTGTA
AAGAAAATTCCCCAGCCGAACAGACTCCCGTGGCTGGTACAATTGTTTTG
ACCTCC

FMO10867.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:39:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31681-RA 949 CG31681-RA 30..479 9..456 2170 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:39:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2286395..2286844 456..9 2120 99.1 Minus
Blast to na_te.dros performed on 2014-11-27 20:39:05 has no hits.

FMO10867.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:49 Download gff for FMO10867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 20..479 1..456 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:23 Download gff for FMO10867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 20..479 1..456 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:06 Download gff for FMO10867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 20..479 1..456 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:06 Download gff for FMO10867.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2286395..2286854 1..456 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:23 Download gff for FMO10867.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2286395..2286854 1..456 98   Minus