FMO10869.5prime Sequence
263 bp (263 high quality bases) assembled on 2011-11-17
> FMO10869.5prime
CAGTCGACATGAAAACAAGCAATCTCGGCCTGTACGCTTTCCGTTTAACC
TTCGGTCAGGCGCCGACGTTGTCCACACAGGCCACGACGCACTGCAGCCA
TGGCTTCACCACCAGCTCGTCGTCGCCCAACCGTGTGGTGACCCGCTCTG
CCACCATGCTGGCGCTCTTCGGCATCGCGCTGTCCTCGTTCAGCCTTAAG
CAACTGCTGGCCAAGAAGCAGAAGCACCAGGGCCTGCGCAAGCTCGCAAG
CTTTCTAGACCAT
FMO10869.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:39:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33199-RB | 1523 | CG33199-RB | 211..448 | 8..245 | 1190 | 100 | Plus |
CG33199-RA | 1091 | CG33199-RA | 211..448 | 8..245 | 1190 | 100 | Plus |
CG8229-RE | 1951 | CG8229-RE | 1121..1308 | 58..245 | 940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:39:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8948756..8948944 | 245..57 | 945 | 100 | Minus |
2R | 25286936 | 2R | 8950705..8950757 | 60..8 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:39:23 has no hits.
FMO10869.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:50 Download gff for
FMO10869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33199-RA | 224..466 | 1..245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:32 Download gff for
FMO10869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33199-RA | 206..448 | 1..245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:11 Download gff for
FMO10869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33199-RA | 206..448 | 1..245 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:11 Download gff for
FMO10869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8948756..8948941 | 60..245 | 100 | <- | Minus |
2R | 8950706..8950762 | 1..59 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:32 Download gff for
FMO10869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4836261..4836446 | 60..245 | 100 | <- | Minus |
arm_2R | 4838211..4838267 | 1..59 | 93 | | Minus |