Clone FMO10869 Report

Search the DGRC for FMO10869

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:69
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33199-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10869.5prime Sequence

263 bp (263 high quality bases) assembled on 2011-11-17

> FMO10869.5prime
CAGTCGACATGAAAACAAGCAATCTCGGCCTGTACGCTTTCCGTTTAACC
TTCGGTCAGGCGCCGACGTTGTCCACACAGGCCACGACGCACTGCAGCCA
TGGCTTCACCACCAGCTCGTCGTCGCCCAACCGTGTGGTGACCCGCTCTG
CCACCATGCTGGCGCTCTTCGGCATCGCGCTGTCCTCGTTCAGCCTTAAG
CAACTGCTGGCCAAGAAGCAGAAGCACCAGGGCCTGCGCAAGCTCGCAAG
CTTTCTAGACCAT

FMO10869.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:39:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG33199-RB 1523 CG33199-RB 211..448 8..245 1190 100 Plus
CG33199-RA 1091 CG33199-RA 211..448 8..245 1190 100 Plus
CG8229-RE 1951 CG8229-RE 1121..1308 58..245 940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8948756..8948944 245..57 945 100 Minus
2R 25286936 2R 8950705..8950757 60..8 265 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:39:23 has no hits.

FMO10869.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:50 Download gff for FMO10869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33199-RA 224..466 1..245 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:32 Download gff for FMO10869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33199-RA 206..448 1..245 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:11 Download gff for FMO10869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33199-RA 206..448 1..245 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:11 Download gff for FMO10869.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8948756..8948941 60..245 100 <- Minus
2R 8950706..8950762 1..59 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:32 Download gff for FMO10869.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4836261..4836446 60..245 100 <- Minus
arm_2R 4838211..4838267 1..59 93   Minus