FMO10874.5prime Sequence
497 bp (497 high quality bases) assembled on 2011-11-17
> FMO10874.5prime
CAGTCGACATGGTGTACCCAGTGCGGAACAAGGACGATCTTGACCAGCAG
CTAATCCTCGCCGAGGACAAGCTGGTGGTAATTGATTTTTATGCAGACTG
GTGCGGACCTTGCAAGATAATAGCACCCAAGCTGGACGAACTGGCGCAGC
AGTACTCGGACCGTGTCGTCGTACTCAAGGTGAACGTGGACGAGAACGAG
GACATTACGGTCGAATACAATGTGAATAGCATGCCCACTTTTGTGTTCAT
CAAGGGCGGCAATGTGCTGGAGCTCTTCGTTGGCTGCAATTCCGATAAGC
TGGCCAAATTGATGGAGAAGCATGCCGGCGTTTATACCGATGAAGCGGCC
GACGTTAAGGCCGTCCATATCGATGGCGAATGCATTGTCGATCTGACCGC
CGAGTCCAGTGAAAGCGACAACGACAACAACAACGTTAATGAGGTGTCCG
CCCACGACGAGAATGCCGTTCTGGAGCACGCAAGCTTTCTAGACCAT
FMO10874.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TrxT-RB | 1104 | CG3315-RB | 44..515 | 8..479 | 2360 | 100 | Plus |
| TrxT-RA | 1108 | CG3315-RA | 44..515 | 8..479 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5311241..5311712 | 479..8 | 2360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:40:05 has no hits.
FMO10874.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:53 Download gff for
FMO10874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TrxT-RA | 40..520 | 1..485 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:53 Download gff for
FMO10874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TrxT-RA | 40..520 | 1..485 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:28 Download gff for
FMO10874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TrxT-RA | 40..520 | 1..485 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:28 Download gff for
FMO10874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5311236..5311715 | 1..485 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:53 Download gff for
FMO10874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5205269..5205748 | 1..485 | 98 | | Minus |
