FMO10876.5prime Sequence
1088 bp (964 high quality bases) assembled on 2011-11-17
> FMO10876.5prime
CAGTCGACATGTCCGCACTACGGCGATCACATGGCGGAGGTCGTGATTTT
CTGCAGGAGAACAAGCAAAATGTGTCTAGAATGGAGACCAATGGCAGATG
TATAGCGGCGGCCAATGCCCGTCGTGTTCCCCTGTGGCGTCCAGTGGTCC
TCCACTATCCGGAGAAGTTGCGTCCCCATGTCTACAATATTCAGCGTCGT
ACACGCCCGCTGCACGGAGCCCATGAGTCTCCTCGCCTGCGAAGCGGTCT
TGCCCAGCCGTATGGCTTTCACAACGAGATGCGCCGCAGGATGCCACCAA
ATCCCTGTGGTTGCGATTTGACCACACGTAAAACGGTGGAACGTAAGGAG
CAGGAGCGCCTACAGGGCGGTTGGGAGGATCAGCAAGTGCCAAGGAAATG
CTGCTCCGGTTGCACCTGCCATCACGGCTATCCGACTAATAAGCCATCTG
ATCAGGATCACCAGGCAAAGGAGGTGTCACAGCATCAGGGTCACCACGGC
CAAGCAGTTGCTCCACATCAGGGTCAACAATCGGAAACGGATGGCCAAAT
CCAACCAAAACATGGCGAAGGTGATCAGGCCGATCGCATTTCGGTATGCT
CCCGCATGTCCCAAGAATCCCGGGCATCTCGGGCATCTCGGGCATCTCGG
GCGTCTCGGGCGTCTCGTCGCTCCGAGGCACAGTCAACACAGGGCCAGGG
AAACAACGATCCCGAGGCACCCTTGAGCGCTCGCAGCAGTGCCTCCACAA
AGACCCTCAAGTCCAAGCGATCCGTTTCCCAGGAGAGTGTGCGCTCGAAT
GCCACCATCAAGTCGAACATTACTGTGGCCTCCAGAAGCACCACGGCTTC
GAAGAGATCTCAAGTCAGTCGCAAGTCGAAGTTAATGGAGGTAATGCCGC
CACCAACCCACTTGGAGGATCGTAGCCCAAGGAGCGAGAGAGGAGAAGCG
CCAACTGCCATCGAAGCACACACCGTTGACCGCCCCAGCGAAGGAACAGC
CTGCTCTCAGATGCCAACGTAATATAGTAGGCTGGTCAGGAATACATCGA
TGGCCGGTTCTGAACCACTTGGCGGTGCCATCGAAAAT
FMO10876.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32591-RB | 1743 | CG32591-RB | 170..1261 | 9..1087 | 4875 | 97.4 | Plus |
| CG32591-RA | 1499 | CG32591-RA | 170..1261 | 9..1087 | 4875 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14927815..14928775 | 966..9 | 4655 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:40:20 has no hits.
FMO10876.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:54 Download gff for
FMO10876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32591-RA | 166..1162 | 1..999 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:01 Download gff for
FMO10876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32591-RA | 166..1162 | 1..999 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:36 Download gff for
FMO10876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32591-RA | 166..1162 | 1..999 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:36 Download gff for
FMO10876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14927815..14928779 | 1..966 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:01 Download gff for
FMO10876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14821848..14822812 | 1..966 | 99 | | Minus |
