Clone FMO10877 Report

Search the DGRC for FMO10877

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:77
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33218-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10877.5prime Sequence

287 bp (287 high quality bases) assembled on 2011-11-17

> FMO10877.5prime
CAGTCGACATGGCTAAAATAAATCTTTGGTTGGGTAAACTCCGTGACTCT
GTTCTGTCCAGGCTGCAGAGCATCAAGAAACCCCTACCCCTTCCTTCGAC
CAAGGGCCCCCTCAATGCCAATGAAACCTCAAATTCCGAAGGTAATATTA
GTGACTTTCAGCAGGGCGATCCAATAATTCCACCCATCGAAGCTAACAAA
ATGATACCGAGGCCTCAAAATGGATTCGTCAGCCGAGCCCTCTACTACCG
AGGATACTACATTAGGCGTGCAAGCTTTCTAGACCAT

FMO10877.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 20:40:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2330411..2330613 67..269 1015 100 Plus
X 23542271 X 2330296..2330355 9..68 300 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:40:26 has no hits.

FMO10877.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:55 Download gff for FMO10877.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33218-RA 135..408 4..279 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:39 Download gff for FMO10877.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2330293..2330355 4..68 95 -> Plus
X 2330413..2330623 69..279 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:39 Download gff for FMO10877.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2330293..2330355 4..68 95 -> Plus
X 2330413..2330623 69..279 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:05 Download gff for FMO10877.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2224326..2224388 4..68 95 -> Plus
arm_X 2224446..2224656 69..279 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:05 Download gff for FMO10877.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2224326..2224388 4..68 95 -> Plus
arm_X 2224446..2224656 69..279 98   Plus