FMO10880.5prime Sequence
1088 bp (987 high quality bases) assembled on 2011-11-17
> FMO10880.5prime
CAGTCGACATGTCTGTTCGCAACTCACGCCCCCAGTTATCGTGGCCGGAG
CGGGTAAGTCCGCAAAGGACTATTGACACTCCAACGGCATCCGGAGAAAT
GTTGACTCGTCGTCAATCGGCACCAGCGTTGGTCGTGCCGCCGGAGGAGA
CCACGCACGTTGTGGTGGTCAAGCGGCAATCCCCGGACGCAGCCGCTGCC
GGAGAACTGGTGCCGTCTAGGCGGAAGGACTCGGTGGCTGTGCAGTCGGG
AATTGTGGCCACTGGGCCATTGGACACAACACGCAGTGGTGCAAGAGACG
ATTTTCTAATGGCTTTGCTCGAGTGCCCGGTGTGCTTTGGCTACATAATG
CCGCCAATTATGCAGTGCCCGCGTGGCCACCTCATCTGCTCCACCTGCCG
CTCAAAGTTGACCATTTGCCCCGTCTGCCGGGTGTTCATGACCAACATCC
GCAGCCTGGCAATGGAGAAGGTGGCCTCCAAGCTGATCTTTCCCTGCAAG
CATTCGCATTTCGGCTGCAGAGCGCGGCTCTCTTACGCAGAGAAGACCAA
GCACGAGGAGGATTGCGAATGCCGTCCGTACTTCTGCCCGTATCCGGATG
ACAAGTGCTCCTGGCAGGGACCGTTGAGGGACGTATACCAGCACCTGATG
AGCTCCCACGAGAACGTGATCACCATGGAGGGCAACGACATCATCTTTTT
GGCCACCAATGTGAATCTGGAGGGTGCCCTCGACTGGACAATGGTGCAGT
CCTGCCATGGGCGGCACTTCCTCCTCTCGCTGGAGAAGATCAATTTGGGA
GAGGACTGTCAGCAGTACTTCACCGCCTGTCGGATGATCGGCTCCATGAA
GATGCCGCCGAGTTCGTGTATAACATCTCCTTGGAGGCCTATATCGCACT
CTCCGCTGGCAATCCAAGCAGATCAATCCGTGAGAACTTCTCCTCGTTCA
CCACGCCGACTCCTGTGCTCATAAGAAACGTCGAACTGGTCTCTGAGACG
GTATCCTTGCCCTGAACGTGGTCATAGGAAAGTGGAGAAGCGTAACTACG
CTAAGCTTCCAACCATTCGTTTGCGCGCGGGACCCAGG
FMO10880.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sinah-RC | 1450 | CG13030-RC | 179..1226 | 9..1044 | 4860 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:40:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16859258..16860305 | 9..1044 | 4610 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:40:48 has no hits.
FMO10880.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:57 Download gff for
FMO10880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sinah-RC | 174..1231 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:15 Download gff for
FMO10880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sinah-RC | 174..1231 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:46 Download gff for
FMO10880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sinah-RC | 174..1231 | 1..1049 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:46 Download gff for
FMO10880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16859253..16860310 | 1..1049 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:15 Download gff for
FMO10880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16852353..16853410 | 1..1049 | 97 | | Plus |
