FMO10882.5prime Sequence
1108 bp (992 high quality bases) assembled on 2011-11-17
> FMO10882.5prime
CAGTCGACATGGCCCACAGGGAGTACAATCGTCGTGATGGCCAGGCAGAG
GGATTGGGACTAGGTGGTGGCGATGCAGACAACAGTGTACGTATGCGACA
CCCCACCCCACCACCGCTGGCGGTGCAGCATGCAAGATCTGGGGCGATGG
TTGTGGAACTGGCAGTGGACCCTTCCCGTGCGATGAGGTCGACCAACCAG
CAGCAGCCAATTGATCGGGATCAGTTGAGGATCAGCACGGAGGAAAGCTG
TCAGGGATCCGAGTTGGTTGTCGCATCATCACATCTATCCAAAAAAATTC
AAGAACATCGCCGACCAAATCAGCTGGTGCGCTTTTGCCTACGATTGGGC
TACAACACCCTGCTGTATCCGTACGAAATGGCCAAGGTTCTTATCCAACT
GGGACATGAACCGCTTCAGGCGAAGCCCTTTGTTATGCGACTGATTCAAC
GGCGGCCACGCCTCTTTTTGCCCAGTGTCCATCGGTATGTGCAGCACATT
CAGCATATAGATGGCTATACGGGAATGTATCGTGGGTTGACCGCTCGCCT
GGCCGCCAGCATAGTAGACTATTTGCTTGGCGATCTTCTGCTGGCTACCT
TGCACTTTGCACCCTATAAGAGAGGCCCCAAGGAGGGACTGAGCCTCAAG
GAGTTCTGGTGGAATCTGACAAGGAACAGCTTGCGCATTACCACCGTAGT
GGTTATAACACATCCCTTTTACGTGGTTATGGTGCGCCAGATAGCCCAGT
TTGTGGGTGGTGAACACGTTTATGAGGGTCTCGTTGGCAGCCTGATGACT
CTTGCGCAACAGGAGGGATGTGCAGGACTTTTTGCGGGCATGGTGCCACG
CCTTTTGGGCGAGTGAGCGTCCTTTTCATTACGAGCGCTCTGAGTCACCT
TTGCCGTCGTCTCCTGCCAATGAGCGAACTCCAGCATCAGTATAACACCG
CGGTAATTCAGATGATGGCAGCCTTATGGCTATTCCACTGGAAGTTGACA
TCACCTGCATGGCCCGACGGAACAACATTTAACCGCATGGGGAGCACGGC
ATGCGCTCTACCATTCACTGAGGTCGACCTGCCTACGGATCTCATGCCCG
GGTGGCCA
FMO10882.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10920-RA | 1764 | CG10920-RA | 127..1232 | 9..1108 | 4880 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7853156..7854118 | 970..9 | 4690 | 99.4 | Minus |
Blast to na_te.dros performed 2014-11-27 20:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R2-element | 3607 | R2-element DMRER2DM 3607bp Derived from X51967 (g8432) (Rel. 24, Last updated, Version 1). | 1675..1750 | 719..795 | 121 | 65.4 | Plus |
FMO10882.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:51 Download gff for
FMO10882.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10920-RA | 96..1120 | 9..1029 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:36 Download gff for
FMO10882.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10920-RA | 96..1120 | 9..1029 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:15 Download gff for
FMO10882.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10920-RA | 127..1151 | 9..1029 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:15 Download gff for
FMO10882.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7853094..7854118 | 9..1029 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:36 Download gff for
FMO10882.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7747127..7748151 | 9..1029 | 98 | | Minus |
