FMO10886.5prime Sequence
641 bp (641 high quality bases) assembled on 2011-11-17
> FMO10886.5prime
CAGTCGACATGCTTTTAATAAGGAGTCTAGTAATTGTGTTTTTAGTAGCG
ATAAGCGAGTTCGATCGAAACTTTGCCATAAACCATGACAATGCTGGAAT
AGTTCTAAGGGAAATAAACAAGAGAAGAGATCGCCATGGAGTCCCAAAAT
TGACATTGGACAACGTGCTCAGTAAGGGATGCCAAAGTTATGCTTGGAAA
CTGTCCAAGTCGGCGACTCTTAACTATTCGGACCCCACTAACAAGGATTA
CACAGAAAGCATCTGCAGATTTGAAGTAAAGAGGGGAGCACTGTCGAGAT
GTGTCAAGAACTGGTATAATGGAAGGAAGTTCGATATTTTAGACCCCAAG
GCTAAAGATTTTACTGCCATGATTTGGAGGTCGTCCGTTTCCTTGGGATA
TGGCGACGCTAACATAAATGCTCTTCAAGGGGTTTTCGTGGTCAGATATA
CTCCACCTGGGAATGTGAAAGGATTATACACGGATAATGTTCCTCCCAGG
AAAAGAAAACAAAAGAAAAAAAAGAGGGAAAACAAACAAAAAGAAGACTG
TGCGAGTCGTCAGGATAATCGATATGTCTTATTGTTGTCCATTCTTTCCT
TGGTGTCTACTAATTGGCAAAGTGCAAGCTTTCTAGACCAT
FMO10886.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31286-RB | 1834 | CG31286-RB | 91..705 | 9..623 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6641621..6641842 | 197..418 | 1110 | 100 | Plus |
| 3R | 32079331 | 3R | 6641426..6641565 | 58..197 | 700 | 100 | Plus |
| 3R | 32079331 | 3R | 6641907..6642032 | 419..544 | 630 | 100 | Plus |
| 3R | 32079331 | 3R | 6642084..6642162 | 545..623 | 395 | 100 | Plus |
| 3R | 32079331 | 3R | 6641322..6641372 | 9..59 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:41:20 has no hits.
FMO10886.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:00 Download gff for
FMO10886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31286-RB | 91..705 | 9..623 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:30 Download gff for
FMO10886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31286-RB | 91..705 | 9..623 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:02 Download gff for
FMO10886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31286-RB | 91..705 | 9..623 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:02 Download gff for
FMO10886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6641622..6641842 | 198..418 | 100 | -> | Plus |
| 3R | 6641907..6642032 | 419..544 | 100 | -> | Plus |
| 3R | 6642084..6642162 | 545..623 | 100 | | Plus |
| 3R | 6641428..6641565 | 60..197 | 100 | -> | Plus |
| 3R | 6641322..6641372 | 9..59 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:30 Download gff for
FMO10886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2467150..2467287 | 60..197 | 100 | -> | Plus |
| arm_3R | 2467344..2467564 | 198..418 | 100 | -> | Plus |
| arm_3R | 2467629..2467754 | 419..544 | 100 | -> | Plus |
| arm_3R | 2467806..2467884 | 545..623 | 100 | | Plus |
| arm_3R | 2467044..2467094 | 9..59 | 100 | -> | Plus |
