Clone FMO10887 Report

Search the DGRC for FMO10887

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:87
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31639-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10887.5prime Sequence

200 bp (200 high quality bases) assembled on 2011-11-17

> FMO10887.5prime
CAGTCGACATGTGCGGTTATGGATGCGGTCCCTATGGCTATGGACCTTCG
GGTCCTTGCGGACCATGGTGCGGACCCTGGTGTAGTCCTTGTGCCCTCTC
GCTAGGACCCTATTCCTGCTGTGGACCCAGTGGATGCGGACCAAGCGGCC
CAGCGTGTTGGCCGTATGGCTTGTACACCTGCGCAAGCTTTCTAGACCAT

FMO10887.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31639-RB 633 CG31639-RB 214..387 9..182 870 100 Plus
CG31639-RA 487 CG31639-RA 132..305 9..182 870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6154702..6154875 182..9 870 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:41:27 has no hits.

FMO10887.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:00 Download gff for FMO10887.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31639-RB 154..345 1..196 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:34 Download gff for FMO10887.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31639-RA 141..332 1..196 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:06 Download gff for FMO10887.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31639-RA 125..316 1..196 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:06 Download gff for FMO10887.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6154691..6154882 1..196 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:34 Download gff for FMO10887.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6154691..6154882 1..196 95   Minus