FMO10888.5prime Sequence
239 bp (239 high quality bases) assembled on 2011-11-17
> FMO10888.5prime
CAGTCGACATGAAGCTGATCGCATTGTGCTGCCTGCTCCTTTTGGGCCTC
CTGGGCTTCCTAGCTGCTCCCGGCGTCGCCTCGCCATCTCGCCACACTGG
ACCAGGAAACGGATCGGGATCTGGAGCTGGGTCCGGAAATCCGTTCAGGT
CTCCAAGCTCACAGCAACGACCACTGTACTACGACGCTCCGATTGGGAAA
CCATCGAAGACTATGTACGCCGCAAGCTTTCTAGACCAT
FMO10888.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10332-RA | 739 | CG10332-RA | 483..696 | 8..221 | 1070 | 100 | Plus |
| IM18-RB | 286 | CG33706-RB | 30..243 | 8..221 | 1070 | 100 | Plus |
| IM18-RA | 739 | CG33706-RA | 483..696 | 8..221 | 1070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23600957..23601170 | 221..8 | 1070 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:41:31 has no hits.
FMO10888.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:01 Download gff for
FMO10888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10332-RA | 479..696 | 1..221 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:37 Download gff for
FMO10888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10332-RA | 479..696 | 1..221 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:08 Download gff for
FMO10888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM18-RA | 479..696 | 1..221 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:08 Download gff for
FMO10888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23600957..23601174 | 1..221 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:37 Download gff for
FMO10888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19488480..19488697 | 1..221 | 98 | | Minus |
