FMO10892.5prime Sequence
1115 bp (1000 high quality bases) assembled on 2011-11-17
> FMO10892.5prime
CAGTCGACATGGATAATGAAAGGATGTCCGCCGTGAGCGAGCACTCAAGT
GTGGTATGCTCTCCCGAACAGATGGCCCAGAAGATCAAAGCCGGTCCCGT
TGTGGATGTCCTCGGTGACGAGATGACCCGCATCATTTGGGACTCCATTA
AGAGCCAACTGATTCTGCCCTTCCTGGACATTGAGCTGCATACCTACGAT
CTGGGTATTGAGAACCGCGATAAAACCGAGGACCAGGTCACCATTGACTG
TGCTGAGGCCATCAAGAAGTACAACGTGGGCATCAAGTGCGCCACAATCA
CTCCCGACGAGAAGCGCGTAGAGGAGTTCAACCTGAAGAAGATGTGGAAG
TCGCCCAACGGTACCATCCGTAACATCTTGGGAGGAACCGTCTTCCGTGA
GGCAATCATCTGCAAGAACGTGCCCCGTCTGGTGACTGGCTGGCAGAAGC
CTATTGTGATCGGTCGCCATGCCCACGCCGATCAGTACAAGGCCGTCGAC
TACGTGGTTCCCGGACCCGGCAAGCTGACCCTCACCTGGAAGGGAACCGA
CGGTCAGGTCATCGATGAGGTCATTAATGACTTCAAGGGCCCCGGTATTG
CCCTGGGAATGTTCAACACGGACGATTCCATTGTGGACTTTGCCCACGCC
TCTTTCAAATATGCTCTGGACCGCAAGCTGCCGCTGTACATGAGCACCAA
GAACACCATTCTGAAGAAGTACGATGGACGCTTCAAGGACATATTCGAGG
ACCTGTACAACAAGCAGTACAAGAAGGAGTACGAGGCGGCGGGCATCTGG
TATGAGCACCGTCTCATCGACGATATGGTTGCTTATGCCATGAAGTCGGA
GGGTGGCTTCGTGTGGGCCTGCAAGAACTACGACGGTGATGTGCAGTCGG
ACTCCGTTGCCCAGGGATACGGATCTCTGGGTCTGATGACCTCCGTGCTG
CTATGCCCCGATGGCAAGACCGTGGAGGCTGAAGCCGCTCACGGAACGGT
GACGCGGTCACTCCGCTCTACCAGCAAGGCAAGGAAAACTCCACCATCCC
ATGCCTCGATATTCCCTGGAACCGTGCCTGCTGCATCGTGCCAGCTGACA
TACATGGACACTGAA
FMO10892.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idh-RK | 1974 | CG7176-RK | 409..1499 | 8..1093 | 5150 | 98.5 | Plus |
| Idh-RD | 1642 | CG7176-RD | 77..1167 | 8..1093 | 5150 | 98.5 | Plus |
| Idh-RF | 1646 | CG7176-RF | 113..1171 | 40..1093 | 4990 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8356879..8357937 | 1093..40 | 4855 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:41:52 has no hits.
FMO10892.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:03 Download gff for
FMO10892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 73..1179 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:50 Download gff for
FMO10892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 73..1179 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:17 Download gff for
FMO10892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 73..1179 | 1..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:17 Download gff for
FMO10892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8356877..8357935 | 42..1094 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:50 Download gff for
FMO10892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8349977..8351035 | 42..1094 | 98 | <- | Minus |
