FMO10893.5prime Sequence
1116 bp (1001 high quality bases) assembled on 2011-11-17
> FMO10893.5prime
CAGTCGACATGATGGAATCCGAGGTAGATTCTGAGCGAACCATGCTAAAG
CGCGAGATCGCCGAGCTGCGCGCAGCGCTCAACCAGAAGGAGCAGTGTCT
GCGAGAATTGGATTCCTTGTTTTCCTTCGCCACAAGGCCAGAGCAGGAGG
TCGTCGGAAATGATCTGGAATCGCCTGATGTTGCAGTCCACACGAAGTTG
ACCAACGACGATATTGCGCGTTACAGCCGCCAGCTTATACTGCCCGACTT
CGGCGTCCAGGGACAATTAAAGCTGAAAAACAGCTCTGTCCTGATTGTGG
GCCTAGGCGGATTGGGATGTCCGGCGGCGCAATACTTGGCGGCAGCCGGA
TGCGGACACTTGGGGCTTGTCGACTACGACGAGGTGGAGCGGAGCAACTT
TCACCGCCAGATTCTGCACTCCGAGGACCGTTGTGGTATGTCCAAGGCTG
AATCGGCGAGGATAGCACTGCTCGAACTGAATCCGCACTGCGAGATTCAG
TGCCATTCCAGGATGCTGTACCCTCATAACGCCATGCACATCATCCGAGG
CTACGACGTGGTTTTGGACTGCACCGATAATGTGCCCACCCGTTATCTAC
TCAGCGATGCCTGCGTCATGCTGAGCAAACCCCTTGTCTCCGGGAGTGCC
CTAAAGATGGATGGTCAGCTGACTGTATACAACTATGCCAACGGGCCCTG
CTACAGGTGTATCTTCCCAGTTCCTCCACCGCCAGAAGCAGTCACCAATT
GCGGAGATGGCGGAGTCCTGGTGCTGTCACCGGTACAATTGGCGCAATGC
AGCTCTGGAGGCCATCAAGTGATTGTGGGATGGGAGATGTCCTCGCCGGA
CGCCTTCTAATCTTCGATGGCGGTAGCGGCGTGTTTCGCAATATTCGCAT
ACGCAGCAAGCGACCCAACTGCCATATGTGTTCCGCTCAGCCGCTGATCA
CGGAGCTAATCAACCTACGAAATGTTTGCGGTATGCATGCAACGACAAAA
CATCCCATGCTACTTTTGTCGACGATGACCGTTTGTCCCGTGAAGACTAC
CAACGAAGATCAGTCCCACCACTATTTGCCTATCCATTGCGCGCCACTGC
AAATTCGGATGCCACT
FMO10893.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13090-RC | 1687 | CG13090-RC | 178..1288 | 9..1107 | 4985 | 97.7 | Plus |
| CG13090-RB | 1540 | CG13090-RB | 31..1141 | 9..1107 | 4985 | 97.7 | Plus |
| CG13090-RA | 1684 | CG13090-RA | 175..1285 | 9..1107 | 4985 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8517667..8518720 | 9..1054 | 4705 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:41:59 has no hits.
FMO10893.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:03 Download gff for
FMO10893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13090-RA | 133..1201 | 1..1061 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:54 Download gff for
FMO10893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13090-RA | 168..1236 | 1..1061 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:19 Download gff for
FMO10893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13090-RA | 168..1236 | 1..1061 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:19 Download gff for
FMO10893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8517660..8518741 | 1..1072 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:54 Download gff for
FMO10893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8517660..8518741 | 1..1072 | 97 | <- | Plus |
