FMO10894.5prime Sequence
1094 bp (989 high quality bases) assembled on 2011-11-17
> FMO10894.5prime
CAGTCGACATGGCCGATGGAAAACAGGGCTGGACATGCCTCCTGGTGCTC
ATATGTGTGTGCATCACCGTGGGCACCGTCATCCCCGTTGGATATGCCTT
CGGTGTGATGAATGCTCCGTCCGCCTTCATTAGGTCGTGGATAATGGAGT
CGGTTCTAGAGCGGTACTCATCACGTCTGGGCGACTCCCAGATGACCATA
ATAATGTCGACCGTGGTCTCCATATTCCTGATAGGTGGCATGCTGGGTGC
TCCGTTTGCCCCGATCTTCAGTGCCCGGCTAGGACGTCGAGGGATTCTGA
CGCTTAGTGGATTGCTCTTGTTGGTGTCCTGCATCTGCCAGCTCTTCTGC
CGGATGGCCAACTCCATCGAGATGCTGCTGCTGGGGCGTCTGATCGGAGG
ACTGGCTGCCGCCCTAATCTATGCCACACAGCCCATGTACTTGGTGGAGT
TGGCTCCAGCAGAACTGAGTGGCAGCGTGGGCGTTTTTACTTGTATCGGG
TTAACCGGCGGCATTGTTTTGGGACAGGTCTTTAGCTTTGATTTCCTACT
GGGCACGGAAAAACTGTGGCCCTACGCGCTGTCCGGTTCCGCCATTTTCG
TATTGATCGGATTGGCACCCATCTTCTGGTTCCCCGAAAGTCCGCGTTTC
CTGATGTCCCAGGGCCGAAGGGAGAAGGCAAGGGTCACGCTGATGCGTCT
GCGGCGGGATGAGGGGCGTGTGAACGCGGAGATGGCGGAGTTCGAGGTCA
GCTCTACAGATGAGGGTCAGTCACCATGAAGCACGTGCTTTGTAACAGTA
AGCTCAAGTTGCCGCTGTTCATCGTTTGCTCCTTCCACTTCGTCCAGCAG
ATGAGCGGCATTAGTGCGATATGGTTTTACTCCTAGAGATCCTCACCCAA
TCCGGATTCACTGCACCGTGCCCATGTGGCTCAACTTCGGCCTTGGGCCT
TTGAACTTCATATTCGCCCTCATGGGACCTGGTCATGAAAGCTTACAGAC
GTCTCATGATGACCATCTTCTGCCTCTGGCCTGGCAACTTTTGTCCCTAC
TTGGCGGTGGCCGGGACTATGCGACATAACATGATTTCCATTAC
FMO10894.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sut3-RA | 1592 | CG17976-RA | 54..1120 | 9..1066 | 4820 | 97.5 | Plus |
| sut3-RB | 1584 | CG17976-RB | 54..1112 | 9..1066 | 4690 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8089705..8090448 | 126..868 | 3655 | 99.7 | Plus |
| 2R | 25286936 | 2R | 8089535..8089651 | 9..125 | 585 | 100 | Plus |
| 2R | 25286936 | 2R | 8090504..8090671 | 868..1028 | 365 | 88.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:41:03 has no hits.
FMO10894.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:58 Download gff for
FMO10894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut3-RA | 55..1101 | 4..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:23 Download gff for
FMO10894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut3-RA | 49..1095 | 4..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:27:54 Download gff for
FMO10894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut3-RA | 49..1095 | 4..1042 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:27:54 Download gff for
FMO10894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8089530..8089651 | 4..125 | 98 | -> | Plus |
| 2R | 8089705..8090448 | 126..868 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:23 Download gff for
FMO10894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3977035..3977156 | 4..125 | 98 | -> | Plus |
| arm_2R | 3977210..3977953 | 126..868 | 99 | -> | Plus |
