FMO10901.5prime Sequence
1135 bp (1041 high quality bases) assembled on 2011-11-18
> FMO10901.5prime
CAGTCGACATGTTTCGAATCTCTGGCCTTCTGAGTTCACTCGTAGTCCTT
ACTTTTGTTCTGGAAATCAGTTGCCTGGAGAATGGCACCCTGGCCAAGCT
GAAAAAGTTTGTGAACTGTGAGTCTAAGGCTTACAAGTCCAGCAATGCGA
TCTACAAGGATTACTGGGTGCTGGAGAACTATGTAATGGCTGATCACGGC
GATATTCCGTGCTATTCGAATGTGACCTACACCACCCATGCGGACTATAC
GTATCTGGATAATGTGGTGCCGCTCCTGGAACGCTGGCGATCGCCCCTCA
GCCTGGCCATATATGCTCCTGGCACGGACTTCGAGCCCACTATACACAGC
ATTTTGTACCTGCTGCAGTGCCATCCTGGCCACGACCTGGTTCGCCAGCT
GTGCAGCATTCATTTGTACTTCGATGTGGAGCACTTGCCCCAGGTGGTTC
TGCCACCCGAAACGACTCTAAGGGAGCCAGCCAACTGTAGTGGACCACCG
CCATATGAGAATGTCGTTAAAGGGAACATGTACAGGTCTCGAAACACACT
GGATTATCCCGTCAATATGGGACGCAACGTTGCACGCCGGGCTTCGCTGA
CGCACTACGTCCTGGCCTCGGACATCGAGCTCTATCCCACGCCCGGATTG
GTGCCCGACTATATGCATTTCCTTGGCCGCCAAGTGATTGGAATTCCAGG
ACAGCAGCCTACTTCGCCGTTGGTCCATGTACTGCGGATTTTCGAGGTAA
TGGCCAATGTATCTGTACCGAACACCAAGCCAGAGTTGCAAGAGATGTTG
AAGTCGGGCGAAGCTGTGCCATTTCACATGGACATCTGTGAGCGTGCCAT
AGGGGACCCAACCTGGAGGAGTGGATAATGCGAGCGTTGTGTCCAGGAAC
TGAATGTCTTCAATGTTGGCCACGCTCGGAAAATACAACAATTGGGAGCC
AATATTTTTGGGCACCGTCGAGGATCCTCATACGATGAGCGATTAACGTG
GGAGGTCACGGGACAGATGACCAGGCGTATGCCATGGTGCGTTCTGACTA
CGATCATATCTGACAAGGCTTCTGTCCTAGCGTATCAACAGCAGGCATCG
TAAGATCTTCTCAGCGCGACCATGCTTACGTAAAG
FMO10901.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:47:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15483-RA | 1382 | CG15483-RA | 49..1103 | 9..1053 | 4875 | 98.2 | Plus |
CG9171-RG | 3950 | CG9171-RG | 1170..1347 | 164..341 | 205 | 75 | Plus |
CG9171-RF | 3736 | CG9171-RF | 956..1133 | 164..341 | 205 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:47:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12761116..12761792 | 685..9 | 3355 | 99.7 | Minus |
2L | 23513712 | 2L | 12760677..12761004 | 1005..684 | 1265 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:47:04 has no hits.
FMO10901.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:28 Download gff for
FMO10901.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15483-RA | 49..1113 | 9..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:25 Download gff for
FMO10901.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15483-RA | 49..1113 | 9..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:18 Download gff for
FMO10901.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15483-RA | 49..1113 | 9..1060 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:18 Download gff for
FMO10901.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12760615..12761004 | 684..1060 | 94 | <- | Minus |
2L | 12761118..12761792 | 9..683 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:25 Download gff for
FMO10901.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12760615..12761004 | 684..1060 | 94 | <- | Minus |
arm_2L | 12761118..12761792 | 9..683 | 99 | | Minus |