FMO10903.5prime Sequence
1025 bp (996 high quality bases) assembled on 2011-11-18
> FMO10903.5prime
CAGTCGACATGAAGGACTCGAGTCAATCGGCGCCGGCAGGCCTTTTGGTG
GCAAATCTGAAGTCTTGGGAAACGTTCGACTGGCCGACGGAGCAGCAGCG
TTGGATCTACCGCAGTTGGGGTCAGTACTTTGCGCGGATGCGGAAGAACA
CCTTTGCCCAGAAGTACTTCGACAAATGCATCACAGAGAATGAGAGCACG
GATCACAAGGCTCTTTATCTGCGCAGCAAATTCAAGAGATCGGTGGCCCT
GACGCAGGACGCATTGGAGGATAGTTTGAGGGCCATGGAGGTAAGGCAGG
CGTGGGACGCAAATGTGTCCATGGAGCTCGGAGATGCGCTCTACGATTTG
AATCGGTTTGAGGAGAACAAGAGCCTGCTGCACGACAATGTCCGTCGGCA
TGCGGGCACCGCTCTAAAGAGCTTCGAGAATCGCCTCGTGGTAGTCGATG
AGAATCTCAAGGATTGCACGGGCTTCAGCCTGGCCAACTTCTTCATGGAG
CATTCCGCGCAGCTGCCCGGCTTCTATGCCCATCAGCAGGAGGAGCTTCG
AAGGGCCGACAGGCGGCCGCTGTGGAAAATCCTCAAGGAGCGAAAGGAGT
GTGATGTCCAGAGCAGGATCGATCGCAAGGAGGTGATGCTCTCCCCACTG
GAAAGAGAGCGCAGGCGTCGCAAGACCAAGATATTTTATCAGAACTATTT
GGGTCGCAGCTGGACCGATTTTTTCTTTCTGAAAACACTTCGCCGGCATC
CCAACTGTCTTCTAGACAATCATTTCGGCTCCTCGGCGGACCGCACCAAG
TATCTTGAGTATGCGTTCCAGCGCCTTAAGACCTTCACACGGATGCTCCA
GGCAAGGAGACCCATGTACAAGGAGTACTTCCATCGGAATCCCCAGATAG
AGGCTCGCATGCGGGATGCGAACTTGTTCCCGGATCCAGTACCAAACCAG
GCGAACATTGTTGAGCATCCTGCGGACCATTACGTTGCTGCGGGGGCGGA
AAGAATATCAGCCGCCTGCGCCAAG
FMO10903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:47:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| r-cup-RA | 2140 | CG10998-RA | 99..1109 | 9..1021 | 4835 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21024799..21025790 | 1001..9 | 4780 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:47:21 has no hits.
FMO10903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:30 Download gff for
FMO10903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| r-cup-RA | 95..1112 | 1..1025 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:34 Download gff for
FMO10903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| r-cup-RA | 95..1112 | 1..1025 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:23 Download gff for
FMO10903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| r-cup-RA | 95..1112 | 1..1025 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:23 Download gff for
FMO10903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21024791..21025794 | 1..1010 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:34 Download gff for
FMO10903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20895818..20896821 | 1..1010 | 98 | | Minus |
