FMO10907.5prime Sequence
698 bp (534 high quality bases) assembled on 2011-11-18
> FMO10907.5prime
AGCTGGAATTGGACATGAAGCACTGCTTTGAGAACCTGATCGTCATCGAC
GTGGGTGCGAATCTGACCAACAAGAAGTATAGCCGTGATCTGGATTCCGT
GGTGCAGAGAGCCAGAGACGCAGGTGTCCAGAAACTAATGGTTCACGGCA
CTTCGGTCAAATCGAGCAAGGAAGCGCTGCGCCTTTCGCGCATCTATCCC
GACATAATCTACTCAACTGCTGGCATTCACCCGCACGACTCCAAGTCCAT
CGTGGAAGAGCCGGCCACGTGGTTCGATCTGGAGCACATCGCCCAGGCGC
AGGAGTGTGTGGCGATTGGCCCCTGCGGCTTGGACTACCAGCGGGACTTC
TCCGAACCGGACGCCCAGAAGCTGATCTTCGCCAAGCAGCTGCATCTGGC
CATCCGGCTAAATAAACCTCTGCTGATCCACGAGCGGTCGGCTCAGCTCG
ATTTACTCGAAATACTAGACAAATTCAAGAATCTTCCGCCTGTGATCATC
AGAGGTTTTATGGGCACCGCCGAGGAGGCGCTTAAGTACCTAGACCGGAG
GTTTCTACATCAGCCTGACGGGCTACCTGTGCAAGGACAATCGGATACTG
GCGTTCGCCGCCTGCTGGAGGACGGCACATTGCCCGCTAGACAGACTACT
GGTGGAGACGGATGCTCCCTTTCATGTACCCAAACACAAGGGCTTCCA
FMO10907.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:47:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3308-RA | 2124 | CG3308-RA | 355..1050 | 1..698 | 3365 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:47:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21272487..21272839 | 472..120 | 1750 | 99.7 | Minus |
3R | 32079331 | 3R | 21272213..21272436 | 698..473 | 920 | 97.8 | Minus |
3R | 32079331 | 3R | 21273339..21273463 | 125..1 | 625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:47:43 has no hits.
FMO10907.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:32 Download gff for
FMO10907.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3308-RA | 353..1047 | 1..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:48 Download gff for
FMO10907.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3308-RA | 355..1049 | 1..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:34 Download gff for
FMO10907.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3308-RA | 355..1049 | 1..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:34 Download gff for
FMO10907.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21272214..21272436 | 473..697 | 97 | <- | Minus |
3R | 21272487..21272835 | 124..472 | 99 | <- | Minus |
3R | 21273341..21273463 | 1..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:48 Download gff for
FMO10907.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17097936..17098158 | 473..697 | 97 | <- | Minus |
arm_3R | 17098209..17098557 | 124..472 | 99 | <- | Minus |
arm_3R | 17099063..17099185 | 1..123 | 100 | | Minus |