Clone FMO10908 Report

Search the DGRC for FMO10908

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13461-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10908.5prime Sequence

437 bp (437 high quality bases) assembled on 2011-11-18

> FMO10908.5prime
CAGTCGACATGCGATTCCTAATTGTCGTTGCTCTTGTGGCCTTTTTGGCT
GTTGGTCTTGTGGCTGCACGGCCAGCTGAGGATGAGGAGTCCTCCATCCA
GGATAACACCAATGAGGATTCGTCCAGTAATGATGGCGAGGGAAACTCCG
ATGCTGCCGAGGAAGAACCTGCTGTTGAAGAAAGTCAAGATTCTGGAAAT
GTGGATAACCAGGATGATGAAAATAGCGAGGATAATCAGGAGGAGTCAGA
TAATGAATCAAGCGGAGATGATGAGGAAGATAACAACGGGTCTGATGATA
ATACCGAATCGGATAATAATAACGATTCAGAAGGCGATCAGGAGCAGGAT
GCTCCACCCAACAACCAGATTCGACCATTCGGACCTCTTCTCATCCAAGC
AAGGCCCCTTTTCCTCGATGCAAGCTTTCTAGACCAT

FMO10908.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13461-RA 560 CG13461-RA 16..426 9..419 2055 100 Plus
CG12310-RA 544 CG12310-RA 42..128 9..95 255 86.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15052065..15052475 419..9 2055 100 Minus
3L 28110227 3L 15050679..15050765 95..9 255 86.2 Minus
Blast to na_te.dros performed on 2014-11-27 20:42:06 has no hits.

FMO10908.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:04 Download gff for FMO10908.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13461-RA 16..429 9..423 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:57 Download gff for FMO10908.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13461-RA 16..429 9..423 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:22 Download gff for FMO10908.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13461-RA 16..429 9..423 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:22 Download gff for FMO10908.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15052062..15052475 9..423 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:57 Download gff for FMO10908.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15045162..15045575 9..423 99   Minus