FMO10912.5prime Sequence
1107 bp (956 high quality bases) assembled on 2011-11-18
> FMO10912.5prime
CAGTCGACATGGCTCAGGTGCGACTGCTGGTACAGGGACTTCGGCGTAGC
CTACTCAATGTGGGCGTGGCCGCGCCCAACGAATCCACAGCGACCCACAA
AAGATCGCAGCACAGCTCGTCGAGCTGCGGAGATTATGATCTGGTTGTCG
TTGGTGGTGGCATCGTCGGCGCCGCATCTGCCCGGGAGATTGTCCTGCGC
CATCCATCCCTCAAAGTGGCTGTCCTGGAGAAGGAGTGCAAGCTGGCAAA
GCACCAGAGCGGCCACAACTCCGGCGTCATCCATGCTGGCATCTACTATA
AGCCTGGAACCCTGAAAGCCCGCCTTTGCGTGGAGGGCATGCATTTGGCC
TACGCTTATCTGGATGAAAAAAAGATCCCGTACAAGAAAACCGGGAAGCT
AATTGTGGCCACGGATGAGAAAGAAGTGAAGCTGCTGAAGGATTTGTAGA
AGCGTGGCATTGCCAACAACGTACCGGATCTGCGAATGATCGAAGGCAGC
GAGATTCAGGAGATCGAACCCTACTGCCAGGGAGTGATGGCGCTCCACAG
TCCGCACACTGGTATCGTTGACTGGGGATTGGTTACCGAGCATTATGGTC
AGGATTTCAAACAGTGCGGTGGTGATATCTACCTGGACTTCAATGTCAGC
AAGTTTACCGAGACCAAGGAGGGCACCGACTACCCAGTGACCATCCATGG
CGCTAAGCCCGGTCAAACGGTTCGTACCAAGAACGTATTAACCTGTGGCG
GTTTGCAATCCGACCTGCTGGCTGAGAAGACTGGATGCCCCAGAGACCCC
CGCATCGTGCCTTTCCGTGGAGAGTATCTGCTGCTGACCAAGGAAAAACA
GCATATGGTCAAGGGTAATATTTATCCCGTGCGGATCCACGTTTCCCCTT
CCTGGGAGTTCACTTTCCGCCGCGAATGGACGGATCTATCCTGCCTGGAC
CAAATGCCGTTCTGCCTTTGAAACCGCGAAGTTACACCTGGGGGTGACCA
TATCTTTTCCAGCTTTTCCGACGGCCCCTGCCGCTATCCGGCGTCGTAAA
GATGGGCGAGCAAGTACCATCCGGGTTTCCGGACTCAGCGAAATGTCCCA
ATCGTGT
FMO10912.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10639-RC | 1870 | CG10639-RC | 336..1426 | 9..1106 | 4930 | 97.4 | Plus |
| CG10639-RB | 1685 | CG10639-RB | 151..1241 | 9..1106 | 4930 | 97.4 | Plus |
| CG10639-RA | 1945 | CG10639-RA | 411..1501 | 9..1106 | 4930 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18972615..18973460 | 974..130 | 4045 | 98.8 | Minus |
| 2L | 23513712 | 2L | 18973917..18974038 | 130..9 | 610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:47:59 has no hits.
FMO10912.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:33 Download gff for
FMO10912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10639-RA | 404..1501 | 1..1107 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:55 Download gff for
FMO10912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10639-RA | 404..1501 | 1..1107 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:41 Download gff for
FMO10912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10639-RA | 404..1501 | 1..1107 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:41 Download gff for
FMO10912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18973917..18974044 | 1..130 | 96 | | Minus |
| 2L | 18972602..18973459 | 131..987 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:55 Download gff for
FMO10912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18973917..18974044 | 1..130 | 96 | | Minus |
| arm_2L | 18972602..18973459 | 131..987 | 98 | <- | Minus |
