Clone FMO10917 Report

Search the DGRC for FMO10917

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12929-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10917.5prime Sequence

452 bp (452 high quality bases) assembled on 2011-11-18

> FMO10917.5prime
CAGTCGACATGCTGGATATCGCTGCACAACTCCTTGCCGTGGGCCTCTTG
TGGGGCGTTACCAATCCGTTTATTCGCCTCGGCAGCCAGGGAATCGAGTC
GGTTGGTGATACGGGCTCAAAGTGGCGTAACTTTGTCCAGGAGGCACGCA
CAATCGGCTCCCGGTGGCGCTATTGGATACCCTTCGGTCTCAACCAGTGC
GGGAGTGCTCTGTACGTTTGGACGCTCCAGAGGGCCAGTATTACAGTGGC
GGTGCCAGTGGCCAATTCCCTGAGCTTCGCATTTACGGCAATCACCGGAT
ATGCGCTGGGGGAAAAACTGCCGGGAAGAAAAGTCATTCTGGGCACCCTG
CTCGTCTGCTGTGGCAGTATCCTGATGATATACGATAAGATTTTGCAGGA
ACAGGCCCAGCACCAGCTAAATATAACATTCCACGCAAGCTTTCTAGACC
AT

FMO10917.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG12929-RA 493 CG12929-RA 50..475 9..434 2130 100 Plus
CG12929-RB 551 CG12929-RB 50..371 9..330 1610 100 Plus
CG12929-RB 551 CG12929-RB 430..533 331..434 520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9586290..9586596 330..24 1535 100 Minus
2R 25286936 2R 9586128..9586231 434..331 520 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:43:12 has no hits.

FMO10917.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:09 Download gff for FMO10917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12929-RA 4..443 1..442 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:30 Download gff for FMO10917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12929-RA 43..482 1..442 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:50 Download gff for FMO10917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12929-RA 43..482 1..442 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:50 Download gff for FMO10917.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9586121..9586231 331..442 96 <- Minus
2R 9586290..9586595 25..330 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:30 Download gff for FMO10917.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5473626..5473736 331..442 96 <- Minus
arm_2R 5473795..5474100 25..330 100 <- Minus