Clone FMO10918 Report

Search the DGRC for FMO10918

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:18
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31730-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10918.5prime Sequence

512 bp (512 high quality bases) assembled on 2011-11-18

> FMO10918.5prime
CAGTCGACATGACTAGCTTTCGGGAAATGCGTTTCGATGATTTGTTCAAA
ATTAATTCACTAGTTTTCGATGCTCTCACCGAGGTTTATAGCCTGACCTT
TTTTGTAAAGCATTTTTTGGAGTTTCCAGGACTCTCACAGATTGCCATAG
CTCCAGGTCCTGATGGCAGACCCATGGGATATATATTCGGGCAGTATCAG
GTCAAGCGCAACCAGGATCCCTATGGTCATGTGGCAGCATTGACTGTATC
TCCGGAGTACCGACGCCTTGGACTGGCCACTGCTCTAATGGATTTTTTCT
TTATGGTCTCAGACCTTAAAGGAGCTTCCTATGTTAACCTCTTTATGCGA
ATCAGTAATCGGGCTGCCTATCAATTGTACACTTCTTTGGGTTATGCTCA
TCGCCAAACATTCCTGGACTACTATCCGGATGAACCGAAGCCAGAAAGTG
CCTACGAATTGAGAAAGTACGTTCCCCGCCCCATGGAGGTTCAAGCAAGC
TTTCTAGACCAT

FMO10918.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31730-RA 680 CG31730-RA 109..594 9..494 2430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13259150..13259635 494..9 2430 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:43:21 has no hits.

FMO10918.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:10 Download gff for FMO10918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31730-RA 1..497 4..500 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:35 Download gff for FMO10918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31730-RA 1..497 4..500 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:53 Download gff for FMO10918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31730-RA 104..599 1..500 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:53 Download gff for FMO10918.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13259145..13259639 1..500 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:35 Download gff for FMO10918.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13259145..13259639 1..500 98   Minus