FMO10919.5prime Sequence
1070 bp (968 high quality bases) assembled on 2011-11-18
> FMO10919.5prime
CAGTCGACATGCCACTGCTGGAGGCACCTGCGGACTACCTGGAGTCCTCT
CCGGATCAATCGCTTCAGGCGGAACTGCCCATCCTTCTGGCACCGCCAGG
ACCGGCCGCCTTGGCCCAGGTCCGGATGCCTCCGCCCGAGGTGCGGCTCA
ATCAGCAGAATCCCGCACAGCAGCAGCAGCAGCGGATGCAGTTCAACCGC
CGCCAACTGGGTCGCCGGAACTCCTTCGATCGGGATGTGGCCATTGCCGA
GGAGGAACAGCACCTTCCGGCCTTCGTCCACCTGCTGCCCGTGGTGCTAC
CCCAACAGGGCCCGGAACCGACACTGGACGAGCTACTGCGCCGAGTGACG
CAACGCACGGATCTGGAGGCGGTGGAGCAAGTGCGTCTGCGCGTGATCTC
TTACACAGTCAGCCTGTCCCGCCTGTCGCTCTTCCTGCCGCGCCTCCAAT
CCCTCGACCTGAGTGGCAGTGTGCTGAGCTCCCTGCGCGACCTGGGCTAT
GGACTCCTCCAGCTAACCCGGTTGGACATCAGCAACTGCGGCCTGAATAG
CTTCGACGGCACCAGTGGACTGCCGGCCATCCGTGTGCTCATCGCCGATG
GAAACATGATCCAGCGGGTTGATCCGCTGGCCGAACTGGTCCACCTGCGC
GTTCTCAAGGCAAGGAACAACCGGATCAGTGAGCTGGGCCTGCTCTCCTT
CTTGGGAATGTGCCCGCAGCTGCAGGAGGTGGAGTTGCAGGCAATCCCGT
GTGTCGTTTACCGCTCTACCGCTCGCTCCTGGCGCGCAGTGTGCCCACGT
TGCAACTGTTGGATGGACGGGTGTTGAACGGTGAACCTGCTCCGGTGGAG
ATGGAGGAGGCCACATCCCCGGCATCAAGTGATCTGGAGTCTGGCTCCGA
GACGACTGCAAACGGCCGAACACGCGCCTGCTCCGGAACCCGTTCCTATC
GCTTGAATGCTTGCCATCGGCGCCAGTGGTCGGCAGCCTCTGGCTCCCAC
TCCATGCCGATCGTTGGGCCTTGGTGCCCAACCGGCGAGGGCCATTGCCC
ACCCTGGTCATTCCCTCCCT
FMO10919.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14185-RA | 1397 | CG14185-RA | 28..1026 | 9..1004 | 4740 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20106517..20107180 | 338..997 | 2955 | 97.7 | Plus |
| 3L | 28110227 | 3L | 20106121..20106450 | 9..338 | 1650 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:43:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1049..1101 | 139..190 | 109 | 69.8 | Plus |
FMO10919.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:11 Download gff for
FMO10919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1038 | 9..1013 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:39 Download gff for
FMO10919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1038 | 9..1013 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:56 Download gff for
FMO10919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14185-RA | 28..1038 | 9..1013 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:56 Download gff for
FMO10919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20106121..20106450 | 9..338 | 100 | -> | Plus |
| 3L | 20106518..20107198 | 339..1013 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:39 Download gff for
FMO10919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20099221..20099550 | 9..338 | 100 | -> | Plus |
| arm_3L | 20099618..20100298 | 339..1013 | 97 | | Plus |
