FMO10922.5prime Sequence
1015 bp (1005 high quality bases) assembled on 2011-11-18
> FMO10922.5prime
CAGTCGACATGTTGGCCACCGGTTTTCTGGCTCGCAGAACCGTACTTAAC
CAGCCGGCGTTCAATTCATGGAGCACACTCCTCCGGACCGCTAGAAAACG
ACCCACATCCACGGTTGCCGCCAGAGTTCCATTAAAGCTTCAGTCACAGC
AGCAATTTACAAGAGCATACTCGTCCTCCAAAACCATGGACACGCCGGCG
GATGTATTCCGCGGCATTACGGATCGATTTGCCGGAGTAACAGTCGATGG
GCGCGAGGAGAACGTGGACAAATCCAGTTTCCGGGACAAGCTCACAAAAT
CCCTGGACTTTTGGACGACGAACAAGAACCGGGCCATTTGGTTCCGCGTG
TACAAGGAGCAGGCTGATTGGGTGCCCATTCTGGCGGAGAACGGCTTTGA
TTTCCATCATGCCAAGACCGGTGTGGTGGTCATGTACCGCTGGTTGCCGG
AGCACGAGTCTAGCAACCTACCCACCTACGCCCACACGCTAATGGGCGTC
GGCGGACTGGTTATCAACGAACAGGACGAGGTGCTGGTGGTGTCCGATCG
TTTTGCAATGATACCAAACAGCTGGAAGCTGCCCGGCGGCTATGTGGAGC
CGCGGGAGAATCTCATCGATGCGGCAATACGAGAGGTGGCCGAGGAGACG
GGAATCCGCACCGAATTCCGCTCAGTGGTCAGTCTGCGGCATGCCCATGG
CGGCACCTTCGGCTGCTCCGACATGTACGTGGTCATCGCCCTAAAGCCAC
TGAATTTGGACTTTACGCGCTGCGAACGCGAGATAGCGCGCATCCAGTGG
ATGCCCATCGCGGAGTATCTGAAGCATCCGCAGTCCACGAGACGAACAGG
CAGTTCGTCTGCACCTTTTTGGACTACCAGAAGCGCGGCCTGACCCTCAC
CTGTCGCGACGAAGTGCATCAAGTGCTAAAGAAGAAATACAATCTGTATT
ACGTGGATCGGGAGCAGCCACAGAGCAGCAAGATAAAAGAATTTCGGCAA
GCCTTCTCAAAACAT
FMO10922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8128-RB | 1809 | CG8128-RB | 648..1635 | 9..993 | 4835 | 99.5 | Plus |
| CG8128-RA | 1530 | CG8128-RA | 369..1356 | 9..993 | 4835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15699162..15699854 | 298..988 | 3335 | 99.4 | Plus |
| X | 23542271 | X | 15698521..15698687 | 9..175 | 835 | 100 | Plus |
| X | 23542271 | X | 15698760..15698881 | 176..297 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:42:22 has no hits.
FMO10922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:05 Download gff for
FMO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8128-RA | 358..1347 | 9..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:05 Download gff for
FMO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8128-RA | 369..1358 | 9..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:29 Download gff for
FMO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8128-RA | 369..1358 | 9..996 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:29 Download gff for
FMO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15698760..15698881 | 176..297 | 100 | -> | Plus |
| X | 15698521..15698687 | 9..175 | 100 | -> | Plus |
| X | 15699162..15699857 | 298..990 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:05 Download gff for
FMO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15592793..15592914 | 176..297 | 100 | -> | Plus |
| arm_X | 15592554..15592720 | 9..175 | 100 | -> | Plus |
| arm_X | 15593195..15593890 | 298..990 | 99 | -> | Plus |
