Clone FMO10925 Report

Search the DGRC for FMO10925

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:25
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG4984-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10925.5prime Sequence

1143 bp (1049 high quality bases) assembled on 2011-11-18

> FMO10925.5prime
CAGTCGACATGAAGCGCGACGTGTCCACGTCGACCATCGGCCGGGATGAG
GCCCGTCGTCCGCTGATGGAGGCCTACATGTTCCAGCGGCGCGTGCTGCT
CGGCTGCAGTCTGCTCATGGTGGTTTCGCTGCTAATCTGGATAGTGGCCA
TCTCGACCGATCACTGGATCATCATATCCGGCGGAAAGGGCATTTTTATA
CCCGAATCTCGACGCTTCTTTATGTCCTCGCACTCGGGCTTGTGGCGCCA
CTGCCGGAACACGATAGTGCCCAATGCCATGAGCAATGCCCAGGTGGTGC
GCAACTTTAGCTCCATGTCGTACACATCGCAGACGAACATCAACGAGGCG
AAGCGGAATCTCTCGCAAATGGACTTCATCAAGGAGTTCGCGCACGAGAA
GCTGGAAACGTCGGACAACTTTACGGAATCGGCGCGTCGCCACATGTTTG
CCCATTGGGTACGGGGCGAGGATATGGAGTTCCAGACGCTGCGCCATGCC
TTTCGCACCCTGGTGATGAACACCGAGGAGAATCAGCGGCAGTTTAATGC
CACGGCCATTAAGCCCATACCCATCAATCCGCTGGACGTGCAGGGAATCA
TTGAGAGAAATACTTTCGGTTCGGCGCTGCAGCGGGTTAAGTACAACAAC
ACTTGGTCTTACTACGTGATCCCGGAGGTGGCGCAGTTAGCCATCTTCAG
GAACTGGACGGATTACCCACTGGTGGTACGACTGCTGGGCACCTACATCC
GGGATATCAGCATCCCGGCCTACGTGCTTAACGATGAACGGGTGATACTT
ATCCTAGTGCCACCGCTGCCGCCCAAGAAAGGTCAGCCCGCCTACTACAG
CTATATACCGAACCAGCGCTGCAAATACATCGACATGTTCCCCAACTCCA
ATGCTCTGCGAAATGAGCCCGGTTTCGATGACGAACTATTGGACTATATC
CCGGACGCAGCGTCCTTTGCCTGCATAAAACTGTTCGTGATGAGCTTGGG
TGCCGTCTTCTCTTCTACAAGTTCATGAATCCGCGCTACATGTTCAAGCG
TCTGGCGGTGGCAATCCACTGGGCTGCCTCACGGGCCTGGTGTGTCTCAG
TGCTCTCTTCCTCCTGAATGAACTACCCAAAGACATCTGGTTC

FMO10925.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:44:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG4984-RB 3112 CG4984-RB 1594..2730 9..1139 4970 96.5 Plus
CG4984-RA 1969 CG4984-RA 451..1587 9..1139 4970 96.5 Plus
CG4975-RE 3112 CG4975-RE 1594..2730 9..1139 4970 96.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17731466..17732141 189..864 3215 98.4 Plus
2R 25286936 2R 17731204..17731385 9..190 880 98.9 Plus
2R 25286936 2R 17732362..17732461 960..1058 420 97 Plus
2R 25286936 2R 17732198..17732275 865..942 360 97.4 Plus
Blast to na_te.dros performed on 2014-11-27 20:44:08 has no hits.

FMO10925.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:13 Download gff for FMO10925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4984-RA 441..1524 1..1080 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:56 Download gff for FMO10925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4975-RE 1586..2669 1..1080 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:09 Download gff for FMO10925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4975-RE 1586..2669 1..1080 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:09 Download gff for FMO10925.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17731196..17731384 1..189 96 -> Plus
2R 17731467..17732141 190..864 98 -> Plus
2R 17732198..17732275 865..942 97 -> Plus
2R 17732345..17732486 943..1080 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:56 Download gff for FMO10925.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13618701..13618889 1..189 96 -> Plus
arm_2R 13618972..13619646 190..864 98 -> Plus
arm_2R 13619703..13619780 865..942 97 -> Plus
arm_2R 13619850..13619991 943..1080 93   Plus