FMO10925.5prime Sequence
1143 bp (1049 high quality bases) assembled on 2011-11-18
> FMO10925.5prime
CAGTCGACATGAAGCGCGACGTGTCCACGTCGACCATCGGCCGGGATGAG
GCCCGTCGTCCGCTGATGGAGGCCTACATGTTCCAGCGGCGCGTGCTGCT
CGGCTGCAGTCTGCTCATGGTGGTTTCGCTGCTAATCTGGATAGTGGCCA
TCTCGACCGATCACTGGATCATCATATCCGGCGGAAAGGGCATTTTTATA
CCCGAATCTCGACGCTTCTTTATGTCCTCGCACTCGGGCTTGTGGCGCCA
CTGCCGGAACACGATAGTGCCCAATGCCATGAGCAATGCCCAGGTGGTGC
GCAACTTTAGCTCCATGTCGTACACATCGCAGACGAACATCAACGAGGCG
AAGCGGAATCTCTCGCAAATGGACTTCATCAAGGAGTTCGCGCACGAGAA
GCTGGAAACGTCGGACAACTTTACGGAATCGGCGCGTCGCCACATGTTTG
CCCATTGGGTACGGGGCGAGGATATGGAGTTCCAGACGCTGCGCCATGCC
TTTCGCACCCTGGTGATGAACACCGAGGAGAATCAGCGGCAGTTTAATGC
CACGGCCATTAAGCCCATACCCATCAATCCGCTGGACGTGCAGGGAATCA
TTGAGAGAAATACTTTCGGTTCGGCGCTGCAGCGGGTTAAGTACAACAAC
ACTTGGTCTTACTACGTGATCCCGGAGGTGGCGCAGTTAGCCATCTTCAG
GAACTGGACGGATTACCCACTGGTGGTACGACTGCTGGGCACCTACATCC
GGGATATCAGCATCCCGGCCTACGTGCTTAACGATGAACGGGTGATACTT
ATCCTAGTGCCACCGCTGCCGCCCAAGAAAGGTCAGCCCGCCTACTACAG
CTATATACCGAACCAGCGCTGCAAATACATCGACATGTTCCCCAACTCCA
ATGCTCTGCGAAATGAGCCCGGTTTCGATGACGAACTATTGGACTATATC
CCGGACGCAGCGTCCTTTGCCTGCATAAAACTGTTCGTGATGAGCTTGGG
TGCCGTCTTCTCTTCTACAAGTTCATGAATCCGCGCTACATGTTCAAGCG
TCTGGCGGTGGCAATCCACTGGGCTGCCTCACGGGCCTGGTGTGTCTCAG
TGCTCTCTTCCTCCTGAATGAACTACCCAAAGACATCTGGTTC
FMO10925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:44:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4984-RB | 3112 | CG4984-RB | 1594..2730 | 9..1139 | 4970 | 96.5 | Plus |
CG4984-RA | 1969 | CG4984-RA | 451..1587 | 9..1139 | 4970 | 96.5 | Plus |
CG4975-RE | 3112 | CG4975-RE | 1594..2730 | 9..1139 | 4970 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:44:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17731466..17732141 | 189..864 | 3215 | 98.4 | Plus |
2R | 25286936 | 2R | 17731204..17731385 | 9..190 | 880 | 98.9 | Plus |
2R | 25286936 | 2R | 17732362..17732461 | 960..1058 | 420 | 97 | Plus |
2R | 25286936 | 2R | 17732198..17732275 | 865..942 | 360 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:44:08 has no hits.
FMO10925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:13 Download gff for
FMO10925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4984-RA | 441..1524 | 1..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:56 Download gff for
FMO10925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4975-RE | 1586..2669 | 1..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:09 Download gff for
FMO10925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4975-RE | 1586..2669 | 1..1080 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:09 Download gff for
FMO10925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17731196..17731384 | 1..189 | 96 | -> | Plus |
2R | 17731467..17732141 | 190..864 | 98 | -> | Plus |
2R | 17732198..17732275 | 865..942 | 97 | -> | Plus |
2R | 17732345..17732486 | 943..1080 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:56 Download gff for
FMO10925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13618701..13618889 | 1..189 | 96 | -> | Plus |
arm_2R | 13618972..13619646 | 190..864 | 98 | -> | Plus |
arm_2R | 13619703..13619780 | 865..942 | 97 | -> | Plus |
arm_2R | 13619850..13619991 | 943..1080 | 93 | | Plus |