Clone FMO10926 Report

Search the DGRC for FMO10926

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:26
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32847-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10926.5prime Sequence

518 bp (518 high quality bases) assembled on 2011-11-18

> FMO10926.5prime
CAGTCGACATGTCGGCTGATACTTTCGTAATGGACACCAAGGATGAATCG
TTCTACGAGTGTAACATATGTCTAGACACCGCCCAGAATGCCGTGGTCAG
CATGTGTGGCCATTTGTTTTGCTGGCCATGTCTGTACCAATGGATATTGA
CGAAACCCGATCACACAGTGTGTCCCGTTTGCAAGTCGGGCGTGGATAGG
AGCAAAGTAATACCGGTGTACGCACGAAATGATAAAAGGCAGGAGGATCC
GCGGGATAAAACACCGCCGCGTCCAACTGGAATTTGGTCGGATTACGCAA
ATGATCTCGAGTTGGGACTATTTTCGTACTTGCTTTTTGGTTTATTCTTT
CCATATGGTGCCCTATCATCTTATCTGGATATGGACGAGCCACTCAATCC
TGCTGCTGATCACGGCATAAGGGATGGGCAGAACGAAACACTCCTTTCTA
AGTTCTTTCTCTACGTGGCCATTATGCTCATTATTTATATGATTGTAATT
GCAAGCTTTCTAGACCAT

FMO10926.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32847-RB 730 CG32847-RB 51..542 9..500 2460 100 Plus
CG8974-RE 1317 CG8974-RE 468..646 52..230 310 78.9 Plus
CG8974-RD 1280 CG8974-RD 431..609 52..230 310 78.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15121622..15122113 9..500 2460 100 Plus
X 23542271 X 15794520..15794698 230..52 310 78.2 Minus
X 23542271 X 15797690..15797868 230..52 310 78.2 Minus
Blast to na_te.dros performed on 2014-11-27 20:44:21 has no hits.

FMO10926.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:14 Download gff for FMO10926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32847-RB 51..549 9..505 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:01 Download gff for FMO10926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32847-RB 51..549 9..505 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:12 Download gff for FMO10926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32847-RB 51..549 9..505 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:12 Download gff for FMO10926.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15121622..15122120 9..505 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:01 Download gff for FMO10926.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15114722..15115220 9..505 99   Plus