FMO10931.5prime Sequence
1106 bp (989 high quality bases) assembled on 2011-11-18
> FMO10931.5prime
CAGTCGACATGTGTGCACGCAAGCGGACGGAGGGCAATCTTTGCCGTCGC
CATAAAAGTGGCTGCAGTGCAAACCAATATAAACTGTGTGAACCGGATGA
GGAGTGCATCCGACTTAAGGATTGCCGACCCATATATTACAATGTGAGGA
GAAACAGATTGTCGGGGTCCGCAAAAGTGAATATATCGCAGACAAGAATG
TGTGGCGTGAGTGTTCGAGACCGGAAACGTTACAAAAGGATTTATATCTG
CTGTCCCAAGCCGGCAAACACCTTGCCAAGCTATCCGGATTGTGGGAAGC
CACAAACGACTAACCGTGTTATAGGCGGCACGGAGCCGAATCTCAACGAA
TATCCGTGGCTGGCCATGCTTCTATATCGAAATCGTAGTGCCTTCAACCC
GGATCGGGAGCTAGTCCCCAGTTGTGGTGGCTCCCTGATTAACACTCGCT
ATGTCCTGACCGCAGCCCACTGTGTAACCGATACGGTCTTGCAAATCCAA
CGCGTCCGCCTGGGCGAGCACACAACGTCCCATAACCCGGACTGCATCAG
CCGGGGCGCACGAATCGTTTGCGCTCCCACACATCTGGACATCGACGTGG
AGTCGATCACATCGCATAATGACTACGATCCAGCCAATTACACCTTTCGG
AACGACATCGCCCTGGTGCGACTCAAAGAGCCAGTGCGATATACGATGGC
TTACTATCCGATTTGCGTTCTGGACTACCCAAGGTCACTGATGAAATTCA
AGATGTACGTGGCTGGATGGGGAAAAACGGGCATGTTCGACACTGGGAGC
AAGGTGCTGAAACACGCTGCCGTCAAGGTAAGGAAACCAGAAGAGTGCTC
GGAAAAGTACGCACACCGGCATTTCGGGCCCAGATTCCAGATATGCGCCG
GCGGCTTGGATACCGGGGCACCTGCCGACGGCGACTCCGGCAGTCCATTG
ATGGGCACATCGGGTCGCAGCTACGAAACATTCACGTTCCTGGCCGGCAT
CACTTCATTACGGAGGTCCTGCGGCCGATTGCTGCCCGAGTGTTTTCCAC
GACGGCCAGGTTTACAATGGATACCGCACCTTAAGCGCAAGCTTCTGAGA
CATCGT
FMO10931.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:44:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31220-RB | 1421 | CG31220-RB | 276..1347 | 9..1074 | 5045 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19649448..19650057 | 79..688 | 3050 | 100 | Plus |
| 3R | 32079331 | 3R | 19650120..19650451 | 688..1020 | 1490 | 98.5 | Plus |
| 3R | 32079331 | 3R | 19648841..19648910 | 9..78 | 350 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 1360 | 3409 | 1360 1360 3409bp | 3309..3374 | 19..81 | 187 | 80.3 | Plus |
FMO10931.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:17 Download gff for
FMO10931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31220-RB | 213..1276 | 9..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:14 Download gff for
FMO10931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31220-RB | 213..1276 | 9..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:21 Download gff for
FMO10931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31220-RB | 276..1339 | 9..1067 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:21 Download gff for
FMO10931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19648841..19648910 | 9..78 | 100 | -> | Plus |
| 3R | 19649448..19650057 | 79..688 | 100 | -> | Plus |
| 3R | 19650121..19650504 | 689..1067 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:14 Download gff for
FMO10931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15474563..15474632 | 9..78 | 100 | -> | Plus |
| arm_3R | 15475170..15475779 | 79..688 | 100 | -> | Plus |
| arm_3R | 15475843..15476226 | 689..1067 | 96 | | Plus |
