FMO10933.5prime Sequence
1116 bp (990 high quality bases) assembled on 2011-11-18
> FMO10933.5prime
CAGTCGACATGGCTAGCAACTACGAGGGCTACAAGTCGCCGCTGAGCACC
CGGTACGCCAGCAAAGAGATGCAGTTCCTCTTCAGTGACCAGAACAAGTT
CTCCACCTGGCGCCGGTTGTGGGTGTGGCTGGCGAAGGCGGAGAGCAGGC
TGGGACTAGAGATCAGCGATGCCCAGATTGCCGAGATGGAGCTCCAGATC
AGCAACATCGACTTTGAGGCGGCCGCCGCCGAGGAGCGACTTACGCGCCA
CGACGTAATGGCCCACGTCCATGTCTTTGCCAAACAGTGTCCCTCTGCTG
CGCCGGTGATCCATTTGGGAGCAACCTCGTGCTATGTGGGCGACAACACT
GATCTGATTGTACTGAGGGACGCTCTTAAACTGCTCCTTCCACGAGTCGC
CAGCGTGATAGCTCGTCTAAGCCAGTTTGCCCAGAGCTACAAGGATCAGC
CCACGTTGGGATTCACCCATCTCCAGCCTGCGCAGTTGACCACGGTTGGC
AAGCGGGCGTGCCTGTGGATCCAGGATCTGATCATGGACGAACGCGCGCT
GTCCCGCTGTTTAGAGGACCTGCGCTTCCGTGGAGTCAAGGGAACTACTG
GTACCCAGGCCTCGTTCCTGCAACTTTTCAATGGGGATGGCGAGAAGGTG
AAGCAGCTGGATCAGTTGGTCACCGAACTGGCTGGCTTCAAGAAGGCCTA
TGCGGTAACCGGTCAAACATACTCCCGAAAGGTGGATGTGGAGATCGTGG
CCGCGCTTGCCAGTCTCGGCACCACCATCCACAAGATGTGCTCCGATCTG
CGCATCCTCGCTTCTCGCAAAGAGCTGGAGAGCCCTTCGAGAGCACTCAG
ATTGGCTCCTCGGCCATGCCGTACAGAGGAACCCTATGCGCTCGGAGCGT
TGTGCGCCCTGGCCCGTCACCTCATCACTTGTTCAGCAGTGCTGCTAATA
CCCATGCCACTCATTGGCTGGAACCCATCTCTGGATGACTCTGCAACAGA
AGTTGACCTATTCGAAGCCTTCCTGCTGCAGATGCCGCCCTGCCTACTCT
GCTGACATCTCGCAAGGACTGTCGTTAACCAAAGGTGAATTGAACGGGCA
CTTTCCCAGAGCTTGC
FMO10933.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdSL-RA | 2341 | CG3590-RA | 127..1241 | 9..1113 | 5055 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17019924..17020994 | 1071..9 | 4740 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:45:02 has no hits.
FMO10933.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:18 Download gff for
FMO10933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3590-RA | 95..1211 | 9..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:22 Download gff for
FMO10933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3590-RA | 127..1243 | 9..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:28 Download gff for
FMO10933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AdSL-RA | 127..1243 | 9..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:28 Download gff for
FMO10933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17019878..17020994 | 9..1116 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:22 Download gff for
FMO10933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12845600..12846716 | 9..1116 | 97 | | Minus |
