FMO10934.5prime Sequence
1113 bp (1018 high quality bases) assembled on 2011-11-18
> FMO10934.5prime
CAGTCGACATGAGCGCCACGACTAGAACACCTGCCACACCGGGGACACCT
GGCACTCCCGGCAGCCTGGCCATGGAAGTGGCCCGCGTCCAGAATTCAGC
ACTCGCCGAGTTTAAAAAGCCCACGGCGATGGTGCGCCACAAGAACAAGC
CAAAGATCCTTACCGAGGAGAAGTACATCGAGGAGATGTCTAAGATCATC
CAGCGCGACTTCTTTCCCGATCTGGAGCGGCTGCGTGCCCAAAACGACTA
CCTGGACGCGGAGTCACGGCGCGACTTTGTACAAATGGCCGAGATTCGGG
AGCGCTACAGTCTGGGCAGGATTTCCGGGACAGGAAGAAGCACCAGCCGA
CGGAATAATGCCATGTCCCCGGCCACATTTGAGACACCAGTGAGTCAGGC
GAAATGTAGCAACACCCCATTGCCAAATTCCCGGGCCACAGACACACCAT
TTTCCACGGACGGCTCCGAGAAGAGCGATGCCGAGGGCAGGGACACCACC
GCGAAGCTATCGCTGGACGCCTTTCTGCAGAAGTACACCAGCGAGGATAA
CCAGAGCTTTCAGGAGATCATCGAAACGGCCGAGGCCAAGCTGCGCCAAA
AATACGCAGTACTGTACAACCATGAGAAGCTCTCCGCAGAGCAACTGCAG
CGGGCCCTAATGCTGCCCAGCATAGAAACGCAATTCGAGGAGCCAGATCC
GCTGAGAAAGATCGAAACCTGAACTACACCAACATGAATTCCATTATGTA
CGTGCCCGATGGCGTGTAGTACACAGAGGAGGAGCGCGTCCAGTTGGCCG
AACGGAAGCAGAGCATCCAACACAATGCCACCAGGCTGCCCGATGAGGCA
AAGCATCGCGAAATGGACACTAAAAAGCTGAATGATGAAGTGCCCCAAAA
TGGGGCTGGTGTGCCACAGCTACTCCGAAGTACGCGGCTTCGATTTGTGC
GTTCACCATCACCGCGACCCGGAGAGGCTTTCTCCGCCCATATGACCTGG
GGGTGGAGATCGATTGCACTCCCTTTCGCTGACGAAGCGAATACCCAATG
GCGGCCCACACAAGACCCTCGTCGGAATAATGGAACTCTCCGCCGAAATT
CGCCATCGCTTGC
FMO10934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Es2-RA | 1729 | CG1474-RA | 93..1206 | 9..1111 | 5015 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8462064..8462772 | 360..1064 | 3000 | 96.8 | Plus |
X | 23542271 | X | 8461571..8461922 | 9..360 | 1760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:43:51 has no hits.
FMO10934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:12 Download gff for
FMO10934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Es2-RA | 91..1209 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:48 Download gff for
FMO10934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Es2-RA | 88..1206 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:01 Download gff for
FMO10934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Es2-RA | 88..1206 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:01 Download gff for
FMO10934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8461566..8461922 | 1..360 | 98 | -> | Plus |
X | 8462065..8462826 | 361..1113 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:48 Download gff for
FMO10934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8355599..8355955 | 1..360 | 98 | -> | Plus |
arm_X | 8356098..8356859 | 361..1113 | 96 | | Plus |