Clone FMO10934 Report

Search the DGRC for FMO10934

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:34
Vector:pMK33-CFH-BD
Associated Gene/TranscriptEs2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10934.5prime Sequence

1113 bp (1018 high quality bases) assembled on 2011-11-18

> FMO10934.5prime
CAGTCGACATGAGCGCCACGACTAGAACACCTGCCACACCGGGGACACCT
GGCACTCCCGGCAGCCTGGCCATGGAAGTGGCCCGCGTCCAGAATTCAGC
ACTCGCCGAGTTTAAAAAGCCCACGGCGATGGTGCGCCACAAGAACAAGC
CAAAGATCCTTACCGAGGAGAAGTACATCGAGGAGATGTCTAAGATCATC
CAGCGCGACTTCTTTCCCGATCTGGAGCGGCTGCGTGCCCAAAACGACTA
CCTGGACGCGGAGTCACGGCGCGACTTTGTACAAATGGCCGAGATTCGGG
AGCGCTACAGTCTGGGCAGGATTTCCGGGACAGGAAGAAGCACCAGCCGA
CGGAATAATGCCATGTCCCCGGCCACATTTGAGACACCAGTGAGTCAGGC
GAAATGTAGCAACACCCCATTGCCAAATTCCCGGGCCACAGACACACCAT
TTTCCACGGACGGCTCCGAGAAGAGCGATGCCGAGGGCAGGGACACCACC
GCGAAGCTATCGCTGGACGCCTTTCTGCAGAAGTACACCAGCGAGGATAA
CCAGAGCTTTCAGGAGATCATCGAAACGGCCGAGGCCAAGCTGCGCCAAA
AATACGCAGTACTGTACAACCATGAGAAGCTCTCCGCAGAGCAACTGCAG
CGGGCCCTAATGCTGCCCAGCATAGAAACGCAATTCGAGGAGCCAGATCC
GCTGAGAAAGATCGAAACCTGAACTACACCAACATGAATTCCATTATGTA
CGTGCCCGATGGCGTGTAGTACACAGAGGAGGAGCGCGTCCAGTTGGCCG
AACGGAAGCAGAGCATCCAACACAATGCCACCAGGCTGCCCGATGAGGCA
AAGCATCGCGAAATGGACACTAAAAAGCTGAATGATGAAGTGCCCCAAAA
TGGGGCTGGTGTGCCACAGCTACTCCGAAGTACGCGGCTTCGATTTGTGC
GTTCACCATCACCGCGACCCGGAGAGGCTTTCTCCGCCCATATGACCTGG
GGGTGGAGATCGATTGCACTCCCTTTCGCTGACGAAGCGAATACCCAATG
GCGGCCCACACAAGACCCTCGTCGGAATAATGGAACTCTCCGCCGAAATT
CGCCATCGCTTGC

FMO10934.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:52
Subject Length Description Subject Range Query Range Score Percent Strand
Es2-RA 1729 CG1474-RA 93..1206 9..1111 5015 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8462064..8462772 360..1064 3000 96.8 Plus
X 23542271 X 8461571..8461922 9..360 1760 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:43:51 has no hits.

FMO10934.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:12 Download gff for FMO10934.5prime
Subject Subject Range Query Range Percent Splice Strand
Es2-RA 91..1209 1..1113 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:59:48 Download gff for FMO10934.5prime
Subject Subject Range Query Range Percent Splice Strand
Es2-RA 88..1206 1..1113 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:01 Download gff for FMO10934.5prime
Subject Subject Range Query Range Percent Splice Strand
Es2-RA 88..1206 1..1113 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:01 Download gff for FMO10934.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8461566..8461922 1..360 98 -> Plus
X 8462065..8462826 361..1113 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:59:48 Download gff for FMO10934.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8355599..8355955 1..360 98 -> Plus
arm_X 8356098..8356859 361..1113 96   Plus