FMO10940.5prime Sequence
1090 bp (990 high quality bases) assembled on 2011-11-18
> FMO10940.5prime
CAGTCGACATGCTGCAGCGCAGTTACGACCTTTCGCCCTCGCCGGCGCGT
ACTTCACCCACCAATGGAGTCCAGAACTTGGGAGCTGGGGCACAGTTGCC
ACCGGCTCAAGTCACTGACTTTAGCATCAGTAAGATTCTGGGCAAGGAGC
GTAAATCCGCTCAGGATACGAGCACGAATATCCTGGATCTATCCAAGAGC
AGTAGCAACAGTATTAGGAGCCCACAGGCTCTTGGAGGGCTGGCAATACC
ATCAACTCCTTATGCCTCCGGTGCCTACTCCATGTTGCCGCCAGATTTGG
TGGCCATGGCCAATGCCACCAAGTTCTATGCCCAATTCTTCCCGCACTTA
CTGCCCGCCTATGCGGCTGCTGCAGCGGCTGCCGGCTTGAGTACTCCTCC
TACGTCGCCCTATCAAACACATCAGCATCAGCAGCATTTGCCAAATCAGC
AGAAACGCTTCTTTGCTCCCTATGTGATCAATGGATCGGTTCCCCCACCA
CCACCACTGCAGCAGCAACAGCAACCTCTCATACGCACCAAAAGCACCGC
ATGCACTCGTCCGGATTGCCCGGAGTGCCTGGATTATTACCAAAGATTGC
AGACTGGTGGCTATAAGCAGACCGCACCTCTCATCTCACCCGCCGCCTCC
TCGGTGAGCAGTTCCACCGGATCAATACGTCCTGTGAGGGATCTGATTAT
GAGTGCCACTGGAGGAGCCGCCAGCACTAACATCTCACTGACCACCGTGA
CCAATCTGAGTCTGACTCGGTCCAGGCAACGGCCGTCGGAATGATGCCCA
AGATGACCGGTGGACTGATCACCACAGCCGTCGGCAGCAACAGTGGAGCA
ATCGGTGGTATCGGTGGATACAATGCCACATCCGCCGAGGAGATCAGCTA
CAAGTGCCGGATTTGCGAGAAGGTATTCGGATGCTCTGAAACTCTGCAGC
TCATGAAAGACGCAAAATCGCCGCGTTACGAGTGTGCGGATTGTGGAAAG
GTTCTCCAACTGCGAAAATACAAATATTACCTGTCGTCACGAGGAACAAG
GAATTGCGCGCGAGTTTCCGATGTGCCAGACTTCCACGGA
FMO10940.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15269-RA | 2122 | CG15269-RA | 180..1235 | 8..1052 | 4970 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15109584..15110526 | 8..949 | 4665 | 99.9 | Plus |
| 2L | 23513712 | 2L | 15112111..15112184 | 965..1035 | 215 | 89.2 | Plus |
Blast to na_te.dros performed 2014-11-27 20:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6794 | 495..548 | 112 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6764..6815 | 495..548 | 112 | 70.4 | Plus |
FMO10940.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:20 Download gff for
FMO10940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15269-RA | 1..1026 | 9..1027 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:34 Download gff for
FMO10940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15269-RA | 175..1206 | 1..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:37 Download gff for
FMO10940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15269-RA | 175..1206 | 1..1027 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:37 Download gff for
FMO10940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15109579..15110526 | 1..949 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:34 Download gff for
FMO10940.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15109579..15110526 | 1..949 | 99 | -> | Plus |
