Clone FMO10941 Report

Search the DGRC for FMO10941

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:41
Vector:pMK33-CFH-BD
Associated Gene/TranscriptEo-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10941.5prime Sequence

1111 bp (963 high quality bases) assembled on 2011-11-18

> FMO10941.5prime
CAGTCGACATGGGCGATCAGCGCGTACACAAACCGCGGACAGCGAAGACA
AGAACCCTTCGCGTCAATAGGATATTATTACCGATGTTGCTTCTGTTTTC
AGGAGAAACTACATCAGTTGTGACCCAATTGTTTTCGGTGGATAGCAGTG
GCCTCGGCATTTCGCTGATGCAATCGGTGGCCATAGCTCTGAATGCATCC
AGCCTCGCCCTGGCCAACAACACCGCCTGGCCGCTGCAACACGAACCGCC
AGAGGATCGGTTGGAGATCGAGAGCTATGACTATATAGTGGTGGGTGCAG
GTAGTGCCGGATCCATTGTGGCCAGTCGATTGAGTGAGCTGTGCCAGGTG
AAGGTCCTGCTGCTGGAGGAGGGACAATTACCACCGCTGGAATCGGAAAT
CTTTGGTCTGACCGGTGCACTGCATCATGACGAGCGGTACATGTTCCTGG
AGGAAGCAGTGCCCAATCCGAAATGCTGCCAGGCAATGGCATCCATGCAC
GGCTGCGTTTGGTGGCATGGTCGCATGATGGGCGGTGGTGGTGCCATTAA
TGGCAATATCTTTATACCCGGCAGTCGGGAGAACTTCAGACGCTGGAATT
CAACCGGCTGGGATTGGACGCAGGTCCATAAGACCTACTCTCGCCTGCAA
CAACGTCTGAATCCCTCCTATCTTCAACCGAATAAGCTAAACTTGAAGTT
GGCCAACCTAATATACTCCGGTTCCGCAGAGCTGGGTGTACCACGGATGA
AACAGCCATTGATAGCGGGTGCTACGTTCGGTTACACTCATCATGTCCCG
GTGACCGTTAACCAAGACGAAGGGCCAGCAGCGCACGTTTGTATTTGGCC
ATGATCAGTGATAGAAGAGGTAACCTAAAGGTAATACGAGGAGCTCAAGT
TCAGCGGGTACTACTAAATGCGGCTGGATCCCGAGCAACTGGAGTGATTA
TACCCTAAATGGTGGGGAAACACGGCGAAACGTTAGGCGAAGTCATCCTA
GGCGCCAGGAACCCTCATTCCGCCAGTTGCTTTCTGCTCCGGCATCCGGC
CGCGGGGAGAGGGAGCTACAGAAATGGAATTAACTACGCACACAGAACCC
TCCGATGGTCG

FMO10941.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:35
Subject Length Description Subject Range Query Range Score Percent Strand
Eo-RA 2045 CG9504-RA 57..1156 9..1103 4955 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14917730..14918744 1017..9 4635 98.9 Minus
Blast to na_te.dros performed on 2014-11-27 20:45:34 has no hits.

FMO10941.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:21 Download gff for FMO10941.5prime
Subject Subject Range Query Range Percent Splice Strand
Eo-RA 1..1042 9..1042 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:37 Download gff for FMO10941.5prime
Subject Subject Range Query Range Percent Splice Strand
Eo-RA 57..1098 9..1042 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:40 Download gff for FMO10941.5prime
Subject Subject Range Query Range Percent Splice Strand
Eo-RA 57..1098 9..1042 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:40 Download gff for FMO10941.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14917675..14918744 9..1071 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:37 Download gff for FMO10941.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14811708..14812777 9..1071 97   Minus