FMO10943.5prime Sequence
910 bp (910 high quality bases) assembled on 2011-11-18
> FMO10943.5prime
CAGTCGACATGTTTTCGATCAGAGTGTGGTTCATCTGCCTGGTGATAGTT
ACCCTCAACTCCTTTCCCGCCTACTCCTGGGATTATTGCCAAGAGCACTG
GTGTCCGCGTTCCACCGACCACGTAGCGTGCAACAACAACGGGACGTTTG
GCCTCGATTGCGGAAGGGAGGCCAGGCTAATCCCGCTCAGCAATCAGTTG
CAGGCGTTCATTGTGCACCAGGTAAACTTCTATCGCAACCAGGTGGCTTC
GGGCGGACTCTCCGCCTTCGGACCCGCCCGCCGAATGGCTAGTGTCCGCT
GGGATCCCGAGCTGGCACAGCTGGCTGAGCTGGCGGCAAAGAGGTGCAGT
TTGTCCGGCGATGGATGCCGCAACACCAGGCGATTCAAGCACGTGGGCCA
GCTGACGGGCCACGTAATCTTCAGTGCGGGAAAGCACAGCGACTTGGAGC
TGCTGCGCCACAAGATCTCGAATTGGTTTGGCCAGTACATGAGAGCCAGC
AAGGATCTGCAAGCCGCCGATCCATCAAGCAACATCAGCAGCTTCCGGCA
GTTGATACAGGAAAGCTCCACCCACATGGGATGCGGCGTGCTCCGCCAGA
GGAGCCACATGCTGTGGCACCAGCAGTTCATCGTCTGTAACTTTGCCCGT
AGGAATATGCCCCGCGAGCAGGTCTACCAGGTGGGCGTGGCTGCCACAGG
ATGCAGGTCGGGAAGGAATCCTCGCTATCCCAATCTCTGCGCTCTGCAGA
AGAATACGATGTGAACGCCGTCGACCGTTTTCACTCAAAGCGGCCACTTA
GATAAAGTTCAAGTACAGCGCATCCCATCCATCGAAAGTTTGGGTGCTGA
TCGTGATGTAGCCTTCCATCCCATATCAAGTTGGGACGTCTTGCAAGCTT
TCTAGACCAT
FMO10943.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3640-RA | 994 | CG3640-RA | 9..896 | 9..892 | 4325 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:45:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24639905..24640658 | 143..892 | 3555 | 99.3 | Plus |
| 2R | 25286936 | 2R | 24639696..24639830 | 9..143 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:45:49 has no hits.
FMO10943.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:22 Download gff for
FMO10943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3640-RA | 1..899 | 2..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:44 Download gff for
FMO10943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3640-RA | 1..899 | 2..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:47 Download gff for
FMO10943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3640-RA | 1..899 | 2..896 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:47 Download gff for
FMO10943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24639687..24639830 | 1..143 | 98 | -> | Plus |
| 2R | 24639906..24640661 | 144..896 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:44 Download gff for
FMO10943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20527210..20527353 | 1..143 | 98 | -> | Plus |
| arm_2R | 20527429..20528184 | 144..896 | 99 | | Plus |
