FMO10947.5prime Sequence
1082 bp (973 high quality bases) assembled on 2011-11-18
> FMO10947.5prime
CAGTCGACATGCGTGGACTGCAGACAAATCGCCACTCAAGCTTCCACCAC
CTGCTCCTCCTTTTCCTGGTCCTCCTGAGATCAGACCGTTGTTTTGGCAT
TGTTTGCTACCACTGCGATTCCATTGCCCTGCCGGAATGTTCCCAGACCC
TCGGAGAAGTGGGAGTTCTTCCCTACAAGGAGTGCGCTACCGAGCTGACG
TGTGCCATGTCCATTGTGGACTCCATTACATACCGCGGCTGCGGAGCAGA
AACCCCCATCATCGGAGCGACTTACTCAAAGACTTGCTCAACGAACCTGT
GCAATGCGGGTGTCTATCCGCCGGGACGACTTAAGTGCCATCATTGCGCT
GGACAGGAATGCGTGGCAGCTCCAGCATCCAAACCAAAACCCTGTCGCTA
TCATTTGGAAGAGGATCAGTGCTACACGGATGTCATAAGTTCTTCAGATG
CCTACAGAGGTTGTACCTCCGAGCAGAATCACACGCTGTCCACTTCCGCC
CAACTGTGTGAGATCAATGGCTGCAATGAGGAGCAAGGAGCTTGGACCCA
AGTCTGCGCCACCTGCGATTCAGCAATCGGCCGGGGTTGCAAGATAGATC
TCTTTCAGGTCAACACCGGCAGGTGCAATGTTAGCTTATACGAGGAATGC
CAGCAGGATGTTCTGTTGGGTGAGCAAGAGGATAAGTACTGCTTCAGCTT
TCGCAGACTAAGCCGCGTTGTCAGAGGATGTTCTACTAAAATTCCAACAG
ATTTGGAGCCGTATGTAGAGCAATTAGAAAAGTGTAATACCAGTGACCAC
TGCAACGCAGATGCATTACGCAGCAGAAGTGTTTTACATGCAACTCCGTG
GATCAGAACTTTGCCGGACAAATATTACGGCTATAGCTAATAGCCACTTG
TAGCTCCGCTGGAGGCCTCTTCCTGTTTCTCCTGTGAGTACTCCAACTGG
GAGTATTCAGCGAAGGCTGTGGGAGCACCGCCGAAAATCCTCAATCACCA
AGTGCTATGAATGCGATTGAATGGCGCTGGCGTAAATGTAAGGATTCACC
GGTGCTACATGCACCACGATCAGGCGGGAACA
FMO10947.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15170-RA | 1718 | CG15170-RA | 7..1080 | 9..1079 | 4915 | 98 | Plus |
CG15170-RB | 1715 | CG15170-RB | 7..1077 | 9..1079 | 4860 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18988972..18989772 | 1017..216 | 3580 | 98.9 | Minus |
2L | 23513712 | 2L | 18989953..18990087 | 216..82 | 675 | 100 | Minus |
2L | 23513712 | 2L | 18990155..18990227 | 81..9 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:48:24 has no hits.
FMO10947.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:35 Download gff for
FMO10947.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15170-RA | 1..1027 | 3..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:07 Download gff for
FMO10947.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15170-RA | 1..1027 | 3..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:51 Download gff for
FMO10947.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15170-RA | 1..1027 | 3..1033 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:51 Download gff for
FMO10947.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18988959..18989771 | 217..1033 | 98 | <- | Minus |
2L | 18989953..18990087 | 82..216 | 100 | <- | Minus |
2L | 18990155..18990235 | 1..81 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:07 Download gff for
FMO10947.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18988959..18989771 | 217..1033 | 98 | <- | Minus |
arm_2L | 18989953..18990087 | 82..216 | 100 | <- | Minus |
arm_2L | 18990155..18990235 | 1..81 | 96 | | Minus |