Clone FMO10947 Report

Search the DGRC for FMO10947

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:47
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15170-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10947.5prime Sequence

1082 bp (973 high quality bases) assembled on 2011-11-18

> FMO10947.5prime
CAGTCGACATGCGTGGACTGCAGACAAATCGCCACTCAAGCTTCCACCAC
CTGCTCCTCCTTTTCCTGGTCCTCCTGAGATCAGACCGTTGTTTTGGCAT
TGTTTGCTACCACTGCGATTCCATTGCCCTGCCGGAATGTTCCCAGACCC
TCGGAGAAGTGGGAGTTCTTCCCTACAAGGAGTGCGCTACCGAGCTGACG
TGTGCCATGTCCATTGTGGACTCCATTACATACCGCGGCTGCGGAGCAGA
AACCCCCATCATCGGAGCGACTTACTCAAAGACTTGCTCAACGAACCTGT
GCAATGCGGGTGTCTATCCGCCGGGACGACTTAAGTGCCATCATTGCGCT
GGACAGGAATGCGTGGCAGCTCCAGCATCCAAACCAAAACCCTGTCGCTA
TCATTTGGAAGAGGATCAGTGCTACACGGATGTCATAAGTTCTTCAGATG
CCTACAGAGGTTGTACCTCCGAGCAGAATCACACGCTGTCCACTTCCGCC
CAACTGTGTGAGATCAATGGCTGCAATGAGGAGCAAGGAGCTTGGACCCA
AGTCTGCGCCACCTGCGATTCAGCAATCGGCCGGGGTTGCAAGATAGATC
TCTTTCAGGTCAACACCGGCAGGTGCAATGTTAGCTTATACGAGGAATGC
CAGCAGGATGTTCTGTTGGGTGAGCAAGAGGATAAGTACTGCTTCAGCTT
TCGCAGACTAAGCCGCGTTGTCAGAGGATGTTCTACTAAAATTCCAACAG
ATTTGGAGCCGTATGTAGAGCAATTAGAAAAGTGTAATACCAGTGACCAC
TGCAACGCAGATGCATTACGCAGCAGAAGTGTTTTACATGCAACTCCGTG
GATCAGAACTTTGCCGGACAAATATTACGGCTATAGCTAATAGCCACTTG
TAGCTCCGCTGGAGGCCTCTTCCTGTTTCTCCTGTGAGTACTCCAACTGG
GAGTATTCAGCGAAGGCTGTGGGAGCACCGCCGAAAATCCTCAATCACCA
AGTGCTATGAATGCGATTGAATGGCGCTGGCGTAAATGTAAGGATTCACC
GGTGCTACATGCACCACGATCAGGCGGGAACA

FMO10947.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15170-RA 1718 CG15170-RA 7..1080 9..1079 4915 98 Plus
CG15170-RB 1715 CG15170-RB 7..1077 9..1079 4860 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18988972..18989772 1017..216 3580 98.9 Minus
2L 23513712 2L 18989953..18990087 216..82 675 100 Minus
2L 23513712 2L 18990155..18990227 81..9 365 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:48:24 has no hits.

FMO10947.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:35 Download gff for FMO10947.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15170-RA 1..1027 3..1033 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:07 Download gff for FMO10947.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15170-RA 1..1027 3..1033 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:51 Download gff for FMO10947.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15170-RA 1..1027 3..1033 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:51 Download gff for FMO10947.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18988959..18989771 217..1033 98 <- Minus
2L 18989953..18990087 82..216 100 <- Minus
2L 18990155..18990235 1..81 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:07 Download gff for FMO10947.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18988959..18989771 217..1033 98 <- Minus
arm_2L 18989953..18990087 82..216 100 <- Minus
arm_2L 18990155..18990235 1..81 96   Minus