FMO10950.5prime Sequence
1102 bp (994 high quality bases) assembled on 2011-11-18
> FMO10950.5prime
CAGTCGACATGAGAGTGTTTTTGGTGGTGTTGAGTGTGCTGTCTGTGGCG
GTGGCCACCAAGTGTCCGTATTCGGCAATGGAACCCTCCTTGTCCAGGTC
CAAACGGAGTTCTTTTGATATTCGCCCAGGAGTTAGTGACGGAAGTTTGG
ATGCCTTGATTAAAGAATTTATGCCCAAGTACAATGGCAACAATGTTCAC
AATAGTTGGGCCGAGCCTTCTGCCTCCCAACAACCTTTAAGATGTGGAGT
TCCGCCTCGCAACTGCTTGAATGATACTCGAAATCTGCACTACCGAACCT
TGGATGGATCATGCAACAATCTGTTGTATCCGGAGTTTGGAATTGCCGTT
TCGCGCTATCGTAGGCTTTTGCCTCCTCGCCAAGTGGAACAGGCTCCGAA
TGCCCGTTTGATCTCCTTGTCGCTGTACGGCGAGCAGACGAGGAACGATA
GGTTCCGCACCATGGCGGCCATGCAATGGGGCCAGTTTGTTGCCCACGAT
ATCAGCCAATTGAGCACACAGGGCGCTCCTCAAGATTGCTGTGCCGAGCC
GCGTCATCCTCGCTGTCTGCCAATCAACCTGCCCCGTGGTGGTCCCATCG
CATACCATACGGGCAAGACCTGTCTGCACTTTGCACGCAGTGTGTCGGAT
GCGGATGCCATATGCCCAAAGGTTGAGGAACCCCAACCGGAGAAGCTAAC
GGTGGCAACTGCTTACCTGGATCTCTCCTCCATCTATGGCACAATCCCTC
GCAAAACAGAAAGGTCCGCTTGTTCAAGGGCGGACTTCTGAAGACCAGCT
ACACGAACGGACACACTGGCTACCGGTGAGCCAAAATGAGAATGGCGAGT
GCGGTGCCAAGAGTGAGTGCTACATCGTACCGGACATTCGGAATCGTTTC
TCGCTCACCATCGCCCTATTGCAGACTCTTGTGGTCCGAGAGCACATCGG
TCTGGCCGAAAATCTAGCGCTGATTATCCCGATCATAATGGACGAGCCCC
ATCTTCCAGGAGCCAGCAGAATATAAATTTGCCCAGTTCCGAAAAATCAA
ATACATGACTGGCTTTCACTGTTCTTTGGTCGACCTATACTACCTTGAAC
GG
FMO10950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:46:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4009-RC | 2214 | CG4009-RC | 28..1124 | 9..1102 | 4930 | 97.3 | Plus |
| CG4009-RB | 2086 | CG4009-RB | 28..1124 | 9..1102 | 4930 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17034922..17036018 | 1102..9 | 4725 | 96.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:46:04 has no hits.
FMO10950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:23 Download gff for
FMO10950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4009-RB | 21..1124 | 1..1102 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:52 Download gff for
FMO10950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4009-RB | 21..1124 | 1..1102 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:53 Download gff for
FMO10950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4009-RB | 21..1124 | 1..1102 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:53 Download gff for
FMO10950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17034922..17036025 | 1..1102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:52 Download gff for
FMO10950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12860644..12861747 | 1..1102 | 96 | | Minus |
