FMO10953.5prime Sequence
1096 bp (983 high quality bases) assembled on 2011-11-18
> FMO10953.5prime
CAGTCGACATGTCAGATGCAGACTACTTGTTCGCTCTGAACCTGCAGAAC
CAGCTAAATGCGGAGTCAGACCAAAGTTACACAGCCGCGGATGCCAGCAA
TGACAGGGACTATCAGCTGGCACGCAGGATTCAGAACCTAATAAACGAGG
GCGATGAGGACGGTGCTAGCGAGCTGGACAGCAGCATTCAGTTCGTCTAC
CCCAAATCGAATCAGCCAAAATCAACAAAAATGGAGAACTCTGAAATCAA
AAACAAAAAACGAGAAGCGGCTAAAAAGAAGCCAGTGCGCGCTATTCAGG
CCAGCCATGATGACTATCTGAATAAGACGATGAATCTGGTGGATCCGGAG
TGGGAGCTGGTCGATCCCACCCCGGACATCTACGCCATGTTCATACGCTT
CGACGAGAAGTTCTTCCAGGAGCGCCTGGGCGCCGTCTCCCTGGAATGGA
GCAAGAAGATGTACTCGTGCGCTGGAATCTGCTACCAGCGTGGCAATCGC
TTCGTCAAACAGGTGACCATTCGGCTCAGTGAGCCGCTGCTAAAGTTGCG
TCCGCGCAAGGATCTCGTGGAAACGCTCTTGCACGAAATGATCCATGCCT
ACTGCTTTGTGCTCAATATACGCGAGGGTAACGGTGGCCATGGACCCAAT
TTCAAGCGCATCATGGAGACGATCAATAAGGTGGCGGGCACCAACATCAC
CGTTTACCACACTTTTCACGATGAGGTGGCCTCCTATCGCACCCACATCT
GGCGCTGCACGGGCATTTGCCGAGAGCGCTCACCCTTTTGGGGCTATGTG
AAGCGGACCAGCAACCGAGCGCCCGGTCCGAACGATCAGTGGTGGAAGAT
GCATCACGTGAGTGCAGCGGCACCTTTTTGAAGTTGAGTGAACCCCCGAA
GGCCCCAAGCCGGAGACCAAGTCAGGGCTAGAGTCCACACCGGGCGGTGG
CCGCGCCCAAGAGACATACGCACTGGTTCGGCCAGCGTCAGCCCAGGAAG
CGGCCACCGGCACAGTCTTACTAGGCGATCTGGCGAAGGCGGTGCCGCCG
GACTTCTAACCGACTCTCTTCGATCTTGCCATGGCAGAACCCACTG
FMO10953.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:46:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9203-RA | 2349 | CG9203-RA | 84..1157 | 8..1071 | 5005 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:46:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15474019..15474496 | 1050..581 | 1920 | 97.3 | Minus |
X | 23542271 | X | 15474603..15474959 | 581..225 | 1785 | 100 | Minus |
X | 23542271 | X | 15475039..15475161 | 224..102 | 615 | 100 | Minus |
X | 23542271 | X | 15475223..15475317 | 102..8 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:46:28 has no hits.
FMO10953.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:25 Download gff for
FMO10953.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9203-RA | 54..1134 | 1..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:05 Download gff for
FMO10953.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9203-RA | 77..1157 | 1..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:03 Download gff for
FMO10953.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9203-RA | 77..1157 | 1..1071 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:03 Download gff for
FMO10953.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15473996..15474495 | 582..1071 | 96 | <- | Minus |
X | 15474603..15474959 | 225..581 | 100 | <- | Minus |
X | 15475039..15475161 | 102..224 | 100 | <- | Minus |
X | 15475224..15475320 | 1..101 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:05 Download gff for
FMO10953.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15368029..15368528 | 582..1071 | 96 | <- | Minus |
arm_X | 15368636..15368992 | 225..581 | 100 | <- | Minus |
arm_X | 15369072..15369194 | 102..224 | 100 | <- | Minus |
arm_X | 15369257..15369353 | 1..101 | 96 | | Minus |