FMO10954.5prime Sequence
1121 bp (1008 high quality bases) assembled on 2011-11-18
> FMO10954.5prime
CAGTCGACATGTGGAAACTCTGTCAGCCGAGAAGTCGAAGTCGGATCAAA
TGTTTCAGATTCCTAATCCTGCGTTGTTGTCCCGGATTCAAGAGATTCTC
GTGCCAATCAGCAGGTGATGCAGACTCCAAAGTCGTCAAGCTATCAGTAG
GGAGTGTCAAGGGTCGTCGACTGAGCGGTATCTATGGTGACGAGTTCTAC
AGCTTCGAGGGAATTCCCTTTGCCAAGCCGCCGCTAGGGAAAGCCCGATT
TGTGGCCTCCCAATTGGCAGACCCATGGAATTCAGAGCTCGATGCTCGGC
AGGAGAGACCGATTCCTCTGCAGATGGACAGAAGGTCGGGAAAGGTCGTT
GGCAGTGAGGATTGCCTGTACTTAAACGTATACACCAAGCATTTTAACGA
ATCTGAGCCACCTCTGCCCGTAATGGTGTATATCTACGGCGGTGCCTTTC
GCACAGGCGGAGCTGTGAAGAGCAAATACGGGCCGGATTACTTGATGAGC
AGGGATGTTGTATATGTGCTATTCAACTATCGCCTCTGCTCCCTGGGATT
CCTTAGTATGCCCAGTGGCAAGTTGGATGTGCCGGGCAATGCGGGTCTCC
ATGATCAGTTACTAGCCCTTCAATGGGTTAGCCAGCACATACGGAACTTC
AACGGAGATCCGCAGAATATAACGCTTTTTGGCGAAAGTGCGGGGGCCGC
CTCGGTGCACTTTATGATGTGTCTGCCGCAGGCGAAGGGTCTCTTCCACA
ATGCCATCATGATGTCCGGATCGATGCTGAGTCCCTGGGTGAATGCTCCC
GATAGCGATGGTATATTCTGCCGCCTGGCCACGTCTGCAGGATACGAAAG
ACCCGCGGAGAGTCCCCATTTTGGAGTTTCTGCGCAACGTGAATGCCGAA
AACTCATCGGCCACGATTTCATCTCACCCCGTGACGTTGCTTTGGGGTTT
CTTAACCCATTTGCCTCCAGTTGTTGGAGGCTGGTTGCAGCCCCGTTTCA
GCAGCTGATGAGGAGCGTGGTTCTGTGAAGTGCCCCTCCTCTTGGGTGGA
CTTCTTCAGGACTGGTTACTACCAATCTGTCAGCTGGAATATGGCCTATG
CTGAACGTTGTAAACATGAAC
FMO10954.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:46:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
alpha-Est6-RA | 1836 | CG1108-RA | 58..1167 | 6..1103 | 5055 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:46:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7525389..7526050 | 1049..393 | 2840 | 97 | Minus |
3R | 32079331 | 3R | 7528334..7528720 | 392..6 | 1935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:46:35 has no hits.
FMO10954.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:26 Download gff for
FMO10954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
alpha-Est6-RA | 54..1167 | 1..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:01:10 Download gff for
FMO10954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
alpha-Est6-RA | 54..1167 | 1..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:08 Download gff for
FMO10954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
alpha-Est6-RA | 54..1167 | 1..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:08 Download gff for
FMO10954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7525328..7526050 | 393..1103 | 96 | <- | Minus |
3R | 7528334..7528722 | 1..392 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:01:10 Download gff for
FMO10954.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3351050..3351772 | 393..1103 | 96 | <- | Minus |
arm_3R | 3354056..3354444 | 1..392 | 99 | | Minus |