FMO10960.5prime Sequence
1114 bp (972 high quality bases) assembled on 2011-11-18
> FMO10960.5prime
CAGTCGACATGTCCCAGATAAACAATATATTCATTAAGCTGCGAGCTCGT
CTGCGGGAGCGTGATATCAAGTTGTGGGAGGAGCCCTACTACTTCGAGGA
GGTGGGCAGCATCGAGTCGGAGATGGACCGCCTGGCCAGGGACATCAGTG
GCGAACTGGGCATCAGTGTGTCGGACTGCAGAATTGCCTTGGGCGAATTG
CAAGATGGTGCCTTGAGGAAGCTGGCGGCTCGCCGAGAGTTCAATGACAC
CGGATTGGCCACGTTCAATGTGCGGTGTGTGGACAGCAAGGGTGGCACCG
TGCAAATGCTGGAGATCAAGTGTTCGCTGGGTGGACTGGGCTCGGATCTG
CAAGCTGAGGTGGCCAAGAAGTTGGATATCGTTGATTCCAGTCATGTGAA
ATGCATCTCCGGAGGACGCATCATCAATGGGCAGAAGACACTGGCCTCGC
AGGGGCTCAAAACCAATCAGCACCTCATGGTGGTTGTGGGTGGAACTAAT
GAAGGTCAGGAGTTGCACGAACGTATCCAAAGGATTCGTGCGGACTTGGA
GTTAGTTGCGGATGCAGATCGCTTTATGGAAATGGAGGATCAAGATGGAC
GTCCAATTTTCTTGCCACGCGAGGAAAATCGATCCCTATTGATGGCCATG
AGCATGTACGAAGTGGCCAGAGTTGCCATGCATAAGGAGAACTTCGATGA
GGCTCTACTCATCCTACTCGAGGCCGATGAACTCTTCTCCCAATGTGACT
CAAGCTCCTGGAAGGAGTGGATAACTATGCCTTAATCAATCTAGATATTG
TTTGGTGCTATCTGCGCCTGAAGAACATCACCCAACTGCCAGATGCACAG
CGACGTTTGGATATTTGCGAGAGGGGCTTTGTCAAGAGCTATGGCGAGCA
GTTCATCCGATGTTCTCGATTAAGGGTCCAAGTAGCCCGGAACGAGCTTT
GATCATGAAACTGCACCTGCTCCAAGGTGTGCTCCTTCTTTCACCAAAAT
CGCCGGATGAGCCTACGAAAAACTTGGAGGGTGGCCGACAAAGACTTGAT
GAAGGTCAAGATGGAATTGAACCTGGACTAAGCCCTTCTCGTTGAATGGG
TCTATGAGGAATCG
FMO10960.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5111-RA | 2005 | CG5111-RA | 88..1193 | 7..1114 | 5010 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25506362..25507362 | 7..1006 | 4770 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:49:08 has no hits.
FMO10960.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:39 Download gff for
FMO10960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5111-RA | 79..1108 | 1..1024 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:30 Download gff for
FMO10960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5111-RA | 79..1108 | 1..1024 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:09 Download gff for
FMO10960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5111-RA | 79..1108 | 1..1024 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:09 Download gff for
FMO10960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25506353..25507382 | 1..1024 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:30 Download gff for
FMO10960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21332075..21333104 | 1..1024 | 98 | == | Plus |