FMO10961.5prime Sequence
1079 bp (946 high quality bases) assembled on 2011-11-18
> FMO10961.5prime
CAGTCGACATGGATCATGATGGGGATACGAGGGACTTTATGCGGGGATAT
CACAGCGAGCAGGATGAGAAAATGAAGCCGAAAGACTCGTTCGATAAGCG
TGAAGATCTGGCTACGGCGATCCTGAAGCGCAAGGACCGTCCCAACCGAC
TGATTGTGGAAGAGGCGCAGAATGACGACAACTCTGTGGTGTCGCTATCG
CAGGCGAAGATGGATGAGCTGCAGCTCTTCCGTGGCGACACCGTGATTCT
GAAGGGCAAGCGCCGAAAGGAGACGGTGTGCATCGTGCTCTCGGACGACA
CCTGTCCCGACGAGAAGATCCGCATGAACCGCGTGGTGCGCAACAACCTG
TGCGTCCATCTTTCAGATGTGGTTTCCGTGCAGTCCTGCCCGGACGTCAA
GTACGGCAAACGGGTGCGCATCCTGCCCATCGACGAAAGCACCGAAGGCG
TTACCGGCAACCTGTTCGAGATCTATCTGAAGCCGTACTTCCTAGAGGCC
TATCGGCCAATCCACATGGGCGACAACTTTATTGTGCGCGCCGCCATGCG
TCCTATTGAGTTCAAGGTGGTGCTGACCGACCCGGAGCCCTACTGCATCG
TAGCTCCCGAGACTGTAATCTTCTGCGACGGTGATCCAATCAAGCGCGAG
GAGGAGGAGGAGTCCCTAAACGCCGTTGGCTACGATGATATCGGTGGTTG
CCGCAAGCAGCTGGCCCAGATCAAGGAGATGGTTGAGTTGCCTTTGCGGC
ATCCATCGCTCTTCAAGGCCATTGGTGTGAAGCCACCGCGTGGTATTCTT
ATGTACGGTCCCCCGGGTACCGGTAAGACCTGATTGCCAGGGCTGTGGCC
AACGAGACCGGAGCCTTTTTTCTTCTGATTACCGAACGGAGATCATGTCA
ACTTGGCCGGAAAATCGGATCAAATTCGGCTTAGGGCTTCTAGGAAATCC
AAAAAAATCTGCCGGTCTATATTCTTCTCTTCATGAAATATGACGCTATT
TTCCTCGACGCGGAGAAAAACCCACGGGAGAGATGGGACGTTCTCATTTG
GTTCGCATCTTTTGATCTGGAATGGATAT
FMO10961.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TER94-RE | 3055 | CG2331-RE | 96..1009 | 9..919 | 4330 | 98.6 | Plus |
TER94-RC | 3058 | CG2331-RC | 96..1009 | 9..919 | 4330 | 98.6 | Plus |
TER94-RA | 3016 | CG2331-RA | 141..967 | 96..919 | 3880 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9990657..9991357 | 201..899 | 3300 | 98.7 | Plus |
2R | 25286936 | 2R | 9990470..9990574 | 100..204 | 525 | 100 | Plus |
2R | 25286936 | 2R | 9990298..9990389 | 9..100 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:49:15 has no hits.
FMO10961.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:39 Download gff for
FMO10961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TER94-RC | 1..893 | 9..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:34 Download gff for
FMO10961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TER94-RC | 96..988 | 9..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:12 Download gff for
FMO10961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TER94-RC | 96..988 | 9..899 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:12 Download gff for
FMO10961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9990298..9990389 | 9..100 | 100 | -> | Plus |
2R | 9990471..9990573 | 101..203 | 100 | -> | Plus |
2R | 9990660..9991354 | 204..896 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:34 Download gff for
FMO10961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5877803..5877894 | 9..100 | 100 | -> | Plus |
arm_2R | 5877976..5878078 | 101..203 | 100 | -> | Plus |
arm_2R | 5878165..5878859 | 204..896 | 98 | -> | Plus |