FMO10963.5prime Sequence
1102 bp (989 high quality bases) assembled on 2011-11-18
> FMO10963.5prime
CAGTCGACATGAAGAGAAAGCGAGTTGCTAGTCGTTTGTTCAACATTTTC
CTTTTGGCGGTTCTGTGCTATCTAATATTGACTTCCCTTTCTGATCGGAA
TAAAACGATTAGTATACGCGAAGTGCCCCAGATCTACATCAATGAGGAAG
ATGAACTCTTTGTCAACACCACGGGATGTCGAATAAGTGCGACGAAACCA
CTTTCGCTTTACGCCCTGTCCTTCATGGAGCCCATTGAACCCGTTTTATG
TAGAATGGAGCAGCTGATGGTCGCCGAGACAATTGGAGACAGGAATTACT
TGGTGCGTAACATATCGCGGCATGGGATTCTCTCCTGGAGGCAAGTCTCC
TGCATTTATCGGGAATTTGTGAGGGTCGATGACGCACACAACAAGTACAT
ATCCTTGAAGTTTTTCAAGCTTACCGATCGAACGAGATACCTTGAGGTGG
GTACTGGTCTGCAACATATTCGCACTTGGTGCTGGGTAGACTTTGGCAGG
ATCATATTCCACGACGTTATGTACTTCCTGCCACCACTGCCTCAGGCTAC
GAACAGATCAACAGAACATCAGAAGAGAAAGCTGTCCGTGATGATCCTGG
GAGTAGATTCTATCTCGCACATGCATTACATGCGTTACTTTCACCGCGTG
GCCGACTTCATCGAGCACCTGCCCCACACCGAATTCTGGGGCTATAATCG
CGTCGCCTTGAACACCTATCCCAACTTGATCCCTCTGGTAAGCGGACTTA
GTGTTTCGGAGATGGAGGCGTCTTGCTACCATGACGAATTGAACTTTGAC
AAATGTAACTTCTTGTGGAATGAATTCAAGAGGGCGGGATACAGCACCAT
CTTTGCAGAGGACACGGATACCGCTGGGCTGTTTATCTACAGAAAGAGGG
CTTTCAGAAGCAGCCCACCGATATTTACATGCGACCTCTGATGACTGAGA
TTGAATCTTCATTCGCTCTACCGCACCACATTCGATTAAAGGTGCACGGT
CATCGTCTCTATGGAGGTTTACTATGATTTCGTCCTTCCAAGCTGATCCG
CACCATTGACGTCGGTTATTTTTCCCATTTTGTGAATGCATGCCTATACA
GA
FMO10963.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3123-RA | 1961 | CG3123-RA | 3..1077 | 9..1081 | 5080 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2824430..2825504 | 1081..9 | 4910 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:49:30 has no hits.
FMO10963.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:41 Download gff for
FMO10963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3123-RA | 3..1054 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:44 Download gff for
FMO10963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3123-RA | 3..1054 | 9..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:18 Download gff for
FMO10963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3123-RA | 3..1054 | 9..1059 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:18 Download gff for
FMO10963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2824429..2825504 | 9..1082 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:44 Download gff for
FMO10963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2824429..2825504 | 9..1082 | 98 | | Minus |
