Clone FMO10967 Report

Search the DGRC for FMO10967

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:109
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42669-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10967.5prime Sequence

1082 bp (985 high quality bases) assembled on 2011-11-18

> FMO10967.5prime
CAGTCGACATGCCTACCACAATCAAGCGGCACAGTACAACCATTGTAATC
AAATCATCCATTTCAGGAACCACCAACTCCCGTCAATCTCCACCAGCGTC
GTCGGCGGAGGTGTCTTCAAGTGCAGCCGACAATTCCATGCACAGTGACG
AGCGGTCCACGCCAAATGCAACGATAGATGCGGAATTCGAACCCTCATCC
CTGTCGCTGGCTGAGCGACTGGCCTTCTTCAGCAATCTGTGCGAGAGCGG
CGGAGGAGGTGGGAGTACCAGTGCCGGTGGAAGGTACCGCAGTCGCACCA
GCAGCTATTCAAGGAGTCCGCCCGGCGATCGCACCACTCCCAGGAGCAGC
ACCACCGCCAGCAGTGTCAGTATGACGCCCACGCCCATGGATTACTCTCC
GATTCCCCACGACAAGGAGCCATCTAGTCTCACGCTGGAGAGCATCATCG
AGCCCGAGCAGGAGGAGGTCAAGGAGCAGGTGGACCAGGATGAGGTCAAG
TTGAGGAAGAAGGAGCCAGTCCAGAGGGAATCTTCCCAGCACAATGGCTT
CCACGTGCTGACCAGGTCCGCCACCGAACCGCCGTCGTCCACCTCGCCCC
TGCGCATCAGCATACGGACTGTGGGAAAGCTAGTCCTGCCCGATACCTTC
CGCGGCGATCGCAACAATAACAGCAGTAGTAGAAGTGGGAGCAACAGCTG
GAGCAACACTTGCATGGTCAAGCTGCAGAGCTTGAGCCCGTTAGCCTGTC
CGTTCATTCGCGCACCATTGGTAAGGTTAAGTCGCCATTCATTGAAAAGC
AGCAGGAGAAACCACACACCGAGAAGCTAGCGAACGGAACCAGCGACAGT
GGCTCCGATTCGGGCAAGGAGACTGCGCCTCCAACGAGCAGGAACATCTG
CAGCACAGCAGTCGCAGGACGAGGATCGAGCTCCGGCCCACGGTGTCCGG
AGATGGCGGAGGAAAATCAGCCGACTGGTGCAACAACAGCAGCGCACCAC
AGCCGGGTCATCGCGCACACAACCGAGAATTCACTCCGGAACGATGGAAC
GCGTCGCCATGTGGACGATCGCTTGCAGTACT

FMO10967.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG45186-RA 2084 CG45186-RA 111..1183 9..1074 4855 97.8 Plus
CG45186-RAD 11244 CG45186-RD 9328..10343 66..1074 4570 97.7 Plus
CG45186-RAC 10679 CG45186-RC 8763..9778 66..1074 4570 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2463056..2463860 189..993 3725 99.1 Plus
3L 28110227 3L 2461088..2461268 9..189 905 100 Plus
Blast to na_te.dros performed 2014-11-27 20:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 655..723 730..661 113 64.3 Minus

FMO10967.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:43 Download gff for FMO10967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42669-RA 104..1095 1..993 98 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:00 Download gff for FMO10967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42669-RA 104..1095 1..993 98 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:32 Download gff for FMO10967.5prime
Subject Subject Range Query Range Percent Splice Strand
CG45186-RA 104..1095 1..993 98 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:32 Download gff for FMO10967.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2461081..2461268 1..189 97 -> Plus
3L 2463057..2463860 190..993 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:00 Download gff for FMO10967.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2461081..2461268 1..189 97 -> Plus
arm_3L 2463057..2463860 190..993 99 == Plus