FMO10967.5prime Sequence
1082 bp (985 high quality bases) assembled on 2011-11-18
> FMO10967.5prime
CAGTCGACATGCCTACCACAATCAAGCGGCACAGTACAACCATTGTAATC
AAATCATCCATTTCAGGAACCACCAACTCCCGTCAATCTCCACCAGCGTC
GTCGGCGGAGGTGTCTTCAAGTGCAGCCGACAATTCCATGCACAGTGACG
AGCGGTCCACGCCAAATGCAACGATAGATGCGGAATTCGAACCCTCATCC
CTGTCGCTGGCTGAGCGACTGGCCTTCTTCAGCAATCTGTGCGAGAGCGG
CGGAGGAGGTGGGAGTACCAGTGCCGGTGGAAGGTACCGCAGTCGCACCA
GCAGCTATTCAAGGAGTCCGCCCGGCGATCGCACCACTCCCAGGAGCAGC
ACCACCGCCAGCAGTGTCAGTATGACGCCCACGCCCATGGATTACTCTCC
GATTCCCCACGACAAGGAGCCATCTAGTCTCACGCTGGAGAGCATCATCG
AGCCCGAGCAGGAGGAGGTCAAGGAGCAGGTGGACCAGGATGAGGTCAAG
TTGAGGAAGAAGGAGCCAGTCCAGAGGGAATCTTCCCAGCACAATGGCTT
CCACGTGCTGACCAGGTCCGCCACCGAACCGCCGTCGTCCACCTCGCCCC
TGCGCATCAGCATACGGACTGTGGGAAAGCTAGTCCTGCCCGATACCTTC
CGCGGCGATCGCAACAATAACAGCAGTAGTAGAAGTGGGAGCAACAGCTG
GAGCAACACTTGCATGGTCAAGCTGCAGAGCTTGAGCCCGTTAGCCTGTC
CGTTCATTCGCGCACCATTGGTAAGGTTAAGTCGCCATTCATTGAAAAGC
AGCAGGAGAAACCACACACCGAGAAGCTAGCGAACGGAACCAGCGACAGT
GGCTCCGATTCGGGCAAGGAGACTGCGCCTCCAACGAGCAGGAACATCTG
CAGCACAGCAGTCGCAGGACGAGGATCGAGCTCCGGCCCACGGTGTCCGG
AGATGGCGGAGGAAAATCAGCCGACTGGTGCAACAACAGCAGCGCACCAC
AGCCGGGTCATCGCGCACACAACCGAGAATTCACTCCGGAACGATGGAAC
GCGTCGCCATGTGGACGATCGCTTGCAGTACT
FMO10967.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG45186-RA | 2084 | CG45186-RA | 111..1183 | 9..1074 | 4855 | 97.8 | Plus |
CG45186-RAD | 11244 | CG45186-RD | 9328..10343 | 66..1074 | 4570 | 97.7 | Plus |
CG45186-RAC | 10679 | CG45186-RC | 8763..9778 | 66..1074 | 4570 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2463056..2463860 | 189..993 | 3725 | 99.1 | Plus |
3L | 28110227 | 3L | 2461088..2461268 | 9..189 | 905 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 655..723 | 730..661 | 113 | 64.3 | Minus |
FMO10967.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:43 Download gff for
FMO10967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42669-RA | 104..1095 | 1..993 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:00 Download gff for
FMO10967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42669-RA | 104..1095 | 1..993 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:32 Download gff for
FMO10967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG45186-RA | 104..1095 | 1..993 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:32 Download gff for
FMO10967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2461081..2461268 | 1..189 | 97 | -> | Plus |
3L | 2463057..2463860 | 190..993 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:00 Download gff for
FMO10967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2461081..2461268 | 1..189 | 97 | -> | Plus |
arm_3L | 2463057..2463860 | 190..993 | 99 | == | Plus |