FMO10968.5prime Sequence
1080 bp (969 high quality bases) assembled on 2011-11-18
> FMO10968.5prime
CAGTCGACATGTTAAAGCCATCCAGGCGACCATTAGCCAACAGACAACGA
TCACTTCGATTCCGTCCACAGAATCGCAAAGGAACATCATCTAGTAACAC
CTCAATGGGACTGGACTTCGAGCTGGATGAGAAGAACGAAGATCAGGCAG
ATGAAAATGAAAAGAGTAGCTATGTCAGCCTCTCCAGGCCGAGCTCCAAA
GTACTAGATACGAGAAGTGCCAGTAGCTTGGACTTCGGGGACCACTGTAG
TCCCAGTATAACAAAATTACCCAAGAACAGCAGGGAAGGTAAGGAGGTCA
GCCTAATCATGAGTGATGAAGAGCCGGAAGATTACAGAAAGGGTCTGGGC
TCGAAGAGGAGGTTGCCAGACTCGGAAGCCCTTGGCAGCAAGCTAAAGGA
GGAACTCTGCAAGTACAAGCAGGAGCTCAAGGACTACAACGAAAGCACCA
AGGATCTGGAGGAGAAGTACATGAAAATTAACTACGAGCTGTGCGAAATG
CAGCAGAAGCACGATCAGTTCGTGTCCAGCAGGAAGCAGGCCCAGCAAAT
GGATCTGGGAAGTGAGCCCGATCCGGATGGATTTTATAGCTCTGCCAGCA
GTGTCACCTCGCAGACGACCATCAGACGAAAGAGCCCCCAAATCCTGCGC
AGCAATACCAGTTTCATGACCGTTCTATCGGGCCAGAGTTCCTGCGACGA
AATCGATAGAAAGAAATACGCGTCCGAAAGGAGTACTCATCAGCAGAATC
ACCATCGGCACAAGACGATCTGCCATCACAGGTGAACAGCGTTTTTGACA
GCCGTATTGTGGAACACTGGCGAACCGTCACGTGAAGCGCAGAGAGATCC
TTGGAGCAGACGATCGGGAAAGGGAGCCAGCATCCTTCAAGGATGTGTAC
AATGTGCTGAAGGATGTGGATCACACCCTCCCCACGATCAGAGTACAGCA
TGAACCGGGATCGAGGTAGGGACAGAGAACGACAGGGACTTCTGGGAGAA
TAAGCAGCTCTTACCACATTAGGACTGAAGAGCGAGCCAGTTCAGTTTCG
ACCTCTCCATTCGGCAGCAGACAGGAGAGA
FMO10968.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8851-RC | 2390 | CG8851-RC | 273..1352 | 9..1080 | 4740 | 97.1 | Plus |
| CG8851-RA | 2275 | CG8851-RA | 158..1237 | 9..1080 | 4740 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:50:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3520379..3521293 | 9..918 | 4345 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:50:07 has no hits.
FMO10968.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:44 Download gff for
FMO10968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8851-RA | 113..1196 | 1..1079 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:04 Download gff for
FMO10968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8851-RA | 153..1236 | 1..1079 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:37 Download gff for
FMO10968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8851-RA | 153..1236 | 1..1079 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:37 Download gff for
FMO10968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3520374..3521308 | 1..935 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:04 Download gff for
FMO10968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3520374..3521308 | 1..935 | 98 | -> | Plus |
