FMO10972.5prime Sequence
1109 bp (1003 high quality bases) assembled on 2011-11-18
> FMO10972.5prime
CAGTCGACATGTTACGTGCCGTGGCTTTGTGTGTGTCTGTGGTGCTCATA
GCACTATATACGCCAACTTCTGGGGAATCCAGTCAGAGCTATCCCATCAC
CACGCTAATCAACGCGAAATGGACGCAGACGCCCCTATATCTGGAAATCG
CCGAGTATCTGGCCGATGAGCAGGCGGGCCTCTTCTGGGATTACGTTTCG
GGGGTGACCAAGTTGGACACGGTTCTCAACGAATATGATACCGAGTCGCA
ACAGTACAATGCCGCCTTGGAGCTGGTCAAGAGCCATGTGAGTTCTCCCC
AATTGCCCCTGCTTAGGCTGGTGGTATCCATGCATAGCTTGACGCCCCGG
ATCCAGACCCACTTCCAGTTGGCCGAGGAACTGAGGAGCAGTGGCTCTTG
TCAGAGCTTTACTTTTGCCCAGGTGGGTTCCGAACTGGCCTGCAGCTTTA
ACGAGCTGCAGAAGAAGCTGGAAGTGCCGCTCGCCAAGGATAGCTTGGAT
GCTTCTGTTGTCACCTACAGCTTTGATCACATTTTCCCTGGCAGTGAGAA
CAATACCCGCACTGTGGTACTATACGGCGATTTGGGAAGCTCTCAATTCC
GCACCTATCACAAACTATTGGAAAAGGAAGCCAATGCTGGCCGGATTCGT
TACATCTTGCGTCATCAATTGGCCAAGAAGGACAAGCGACCGGTACGACT
TTCGGGCTATGGAGTGAAACTCCATCTGAAGTCAACGGAATACAAGAGTC
ACGATGATGCTCCAAAGCCCGAAGCTGGTTCCACTTCTGATGAGGATTTG
GCTAATGAATCGGACGTCCAGGGCTTTGATTTCAAGGTGCTGAAGCAGAA
GCATCCTACACTTAAGAGAGCGCTGGATCAACTGCGTCAGAGGCTTCTTC
AAGGAAACGATGAGATCGCCCAATTGAAAGCATGGGAGTTCCAGGATTTG
GGTCTCCAGGCGGCCGCTGCTATGCAGAAATAAAAGGTGATGAAACCCTA
CAATTCTCCATATACTGCCCATATTTCCATGGTTGGCCAGAAACCTGCTG
TCCCAAGTTACCGATTGCTTAAGGGCGGGAGTAAGCATATCGAGCATTGG
TAGAGTCTG
FMO10972.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt-RA | 5316 | CG6850-RA | 203..1293 | 8..1089 | 5025 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:50:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18873361..18874210 | 237..1078 | 3735 | 97.1 | Plus |
| 3L | 28110227 | 3L | 18872949..18873178 | 8..237 | 1150 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:50:39 has no hits.
FMO10972.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:47 Download gff for
FMO10972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt-RA | 203..1293 | 8..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:18 Download gff for
FMO10972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt-RA | 203..1293 | 8..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:49 Download gff for
FMO10972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt-RA | 203..1293 | 8..1089 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:49 Download gff for
FMO10972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18872949..18873178 | 8..237 | 100 | -> | Plus |
| 3L | 18873362..18874222 | 238..1089 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:18 Download gff for
FMO10972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18866049..18866278 | 8..237 | 100 | -> | Plus |
| arm_3L | 18866462..18867322 | 238..1089 | 97 | | Plus |
