FMO10975.5prime Sequence
1091 bp (981 high quality bases) assembled on 2011-11-18
> FMO10975.5prime
CAGTCGACATGGACGACCTGTCGCAGGGCGACATTTGCCGCGTGTGCAGA
TGCGAGGCACAGCCGGATAGGCCTCTTTTCTACCCGTGCATCTGCACTGG
ATCGATCAAGTACATTCATCAGGACTGCCTGATGTTATGGATGCGCTACT
CGCACAAGGAATACTGCGAGCTGTGCAGCTACAGCTTCAGCTTTCAGCCC
ATCTATGCTCCGGATATGCCGCGAGTCCTGCCGATAAAGGATGTCCTTGT
GGGACTGATGTCCGCCGTTTTGGAGGGCGCTCGCTGCTGGCTTCATTACA
CCCTGGTCGGTTTGGCCTGGTTCGGAGTGGTGCCGCTGTCTGCCTACAGG
ACCTATCGGTACCTCTTCCGGGCGAGCTCCTTCGATATGATTCTCACGCT
GCCCTTTGACATCTTCTCCGTTGAAAACCTGGCATCGGATGCCTTTCGGG
GCTGTTTTGTGGTCACATGCACACTTTTGTCCTTCATAGGATTGGTCTGG
CTGCGCGAGCAGATCCTGCATGGCGGCGGACCCGATTGGCTGGAGCGGGA
CGATGCCCCTCTACAGGCAGCGGCTGCTAATCCTGCGCCTGATCCCGCCG
CCGAGGCAGCTCCACAGCCTCAGGACGACAACAACAATGCCGACGACAAT
GAAGCGCCGGCTCCAGCGGACAACGATGGGCAGGATGCCCAGGCCCAGGA
TGCCGCACCAGCGGCTGCAGCTCCCGTCGTGGACGCCGATGCCGATGAGC
AGAATTGGAATCCCATGGAGTGGGATCGGGCTGCCGAGGAGCTTACCTGG
GAACGCCTGCTCGGACTCGATGGCTCGCTAGTTTTTCTGGAGCACGTCTT
CTGGATCATCTCACTGAACACCATGTTCATCTTCACCTTCGCCTTTTGTC
CCTACTGCGTGGGCAACTTCATTCTGAGCTCCATGGATTCTTTTGCAGCC
CGAGAACCACTGCTACCACTTTCACGCCTGATAACCACGCTAATTTGGTA
AACTGCTGCATTGATGACCTGGTGGTGCTGCACTTCCTTCTCCAAGTTTC
CGCCTGGCGGAGAGGTCTGCCTGGTTCATTTGAATGGCTCA
FMO10975.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1317-RD | 3836 | CG1317-RD | 278..1348 | 9..1080 | 4990 | 98.4 | Plus |
| CG1317-RC | 3665 | CG1317-RC | 278..1348 | 9..1080 | 4990 | 98.4 | Plus |
| CG1317-RB | 3869 | CG1317-RB | 278..1348 | 9..1080 | 4990 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2370679..2371662 | 992..9 | 4715 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:50:55 has no hits.
FMO10975.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:48 Download gff for
FMO10975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1317-RC | 295..1379 | 1..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:26 Download gff for
FMO10975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1317-RB | 274..1358 | 1..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:57 Download gff for
FMO10975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1317-RB | 274..1358 | 1..1090 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:57 Download gff for
FMO10975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2370581..2371666 | 1..1090 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:26 Download gff for
FMO10975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2370581..2371666 | 1..1090 | 97 | | Minus |
