FMO10979.5prime Sequence
1092 bp (985 high quality bases) assembled on 2011-11-18
> FMO10979.5prime
CAGTCGACATGACGAAAGTTACTGAGGGAGAAATTTCACATGGCGTTCAA
GATGTCGGGAAATATTATCTGGATTTTCACCTTCTAGCCAAAGGATTCGT
CCGCCAGGACTCGGTACACGACTTTGTAAACAGCGATTCCGATGGAGACT
TTATAGCACTGAGCGGCTCCAAATCGGAAGTGATCACTCTGGAATTGAGC
AGCAAGTTCATGGTCGTGGATCCCTTTCCGTATTTTGTGGCCATTTATGA
TTCCAACGCTGCGGAAACACGACCTCTGGACGTTTTGGCCAACAAAGTGG
ATCTGGTTGCCATATACGACAGCTGCGATGTCCTGGAGGCACAGCACTTG
GCCCTGGACCCGGCATACACGGCTGTGTGCTCCGTTGCCGTGCCACCAGC
CAGACTAACAGCTGTTAAGCGAGCACCCAAGCTGGCAGCTAATGGAAATC
TCCTCCTGGGCTCCCTCAACACTTATGGATCCTTGAGCCTAATAAACAAG
TCCGCTGAGTACAATCGTTGGAACCCTGTGGAAGGACTAAATATCGCTGA
AACTCTGAGGGACACTCTGCTGCCTGAAGTGGACATCGCCAAGATAAAAG
ACTTTAAGAGCTATCAAGAATATATTAATCCCGCCTGGATCACTATGTTT
GCTTGGTTACCTGATGATGCAGATGCCACTGGCCAGCATGTTTTGGTTCT
GGGAACAGCCGCAGGAAGTTTGTGGTTGCTCACACTAAGCGCCGATGTCA
AAACTCTTTTAAGTCATCAAGAAACGAAAACCTCAATGGGTCGTATCTGC
CATATACAAGCTTTCAAGGACCTTCTACTGGTGGCGATAGCAACGGACTC
ATTCACCTGTACCAATTGCCAGCTAAGGAAATACAGCTCTCGCCTTAGTG
AAGCCCTTGTGGGAGAAAGCCGATCGCCATGGGTTCTGCAATGGCAGTGG
ATCCACTGAATTGTCCCAGAATGGATTGCTATTTATTATACCTGCTGCAA
GGCGGGGCACCCTGCTGACCTGGAGCATGCAGAACGGGGAGACACGAACT
GCCTTCAGCTCCGGAATATGTTCGCGAAAGAAGATACACGCC
FMO10979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:51:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12182-RC | 3493 | CG12182-RC | 257..1303 | 5..1054 | 4855 | 98.2 | Plus |
CG12182-RA | 2368 | CG12182-RA | 257..1303 | 5..1054 | 4855 | 98.2 | Plus |
CG12182-RB | 2508 | CG12182-RB | 455..1443 | 63..1054 | 4580 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:51:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2598108..2599070 | 1030..64 | 4315 | 98 | Minus |
3L | 28110227 | 3L | 2599265..2599323 | 63..5 | 280 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:51:26 has no hits.
FMO10979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:51 Download gff for
FMO10979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12182-RA | 214..1265 | 1..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:44 Download gff for
FMO10979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12182-RA | 252..1303 | 1..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:09 Download gff for
FMO10979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12182-RA | 252..1303 | 1..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:09 Download gff for
FMO10979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2598083..2599070 | 64..1054 | 98 | <- | Minus |
3L | 2599265..2599326 | 1..63 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:44 Download gff for
FMO10979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2598083..2599070 | 64..1054 | 98 | <- | Minus |
arm_3L | 2599265..2599326 | 1..63 | 95 | | Minus |