FMO10983.5prime Sequence
1121 bp (1007 high quality bases) assembled on 2011-11-18
> FMO10983.5prime
CAGTCGACATGTCTCACCTGACCGGCACCCGCGTGAGCACCTTCAACGAG
AGCTTCCTTAACGAAAATGAGCACGACTCGAATGCGGTGCTCATGGAACT
GGACAAGGGACTGCGGAGCACCAAGCAGGGAATCCAGTGCGAGGCGGTCG
TCCGCTTTCCGCGCCTCTTCGAGAAGTATCCGTTTCCCATTCTCATCAAC
TCGTCGTTCATTAAGCTGGCCGATTACTTTGTCAGCGGATCGAATCTGCT
GCGCTTCTGGGTGCTCCGTGTTTGCCAGCAGAGCGAGAATCATCTGGACA
AGATCCTCAACATTGACAGCTTTGTGCGCTGTATCTTTGTGGTGATGCAC
TCCAACGATCCGGTGGCGCGTGCTCTCCTCCTGCGCACCTTGGGCGCCGT
TTCCCGTGTGATTCCCGAGAAGCAACAGGTTCATCATGCCATTCGACGTG
CTCTGGATAGCCACGATACCGTCGAGGTGGAGGCTGCCATCTATGCCAGC
AGCTGCTTTGCCGCCCAGTCAAGTTCCTTTGCCATCAGCATGTGCGCCAA
GATTTCGGACATGATCGAATCGCTTCAGGTGCCGGTGCCAATGAAGCTGC
TCCTGATTCCCGTGTTGCGACACATGCATCACGAGGCTACCACAGCGTCA
CTGGTTAGCAGACTGTGCATGGATCTGCTGCCCAAATATCCAGCCCAGAG
CTTTGTGGTGGCCATCATAGACACGCTCACTCAATTGTCATCACGAACGC
TGGTGGGAGTGCCCGGTCAGCTGGATGTTCTGCTGGATTTCATGCAGGAC
TTAAGGACACCAGTACGCATACAGGTGCTGCGATCTTTCAACGAGTTGCC
GGACGTCAGAGCGTTCATGCCTGGCCCAAGCCAGCCATCAAAGCGCTCAT
TGATCGTTTTGATTGTGTACAAATTCCCAGGAGCAGTTCCTCTCTCTCAA
TCCTGCTGAAGTTAAGCGAGTGCCGCTTACTTGCCAGCAGCTGCTTCCGG
AGCATCGCGGTAGCCTGCTCGTTGGGCATCCAGTGCATTAGCAGCTGACG
ACTACCCCACCGCCCACTCAGACATGCAGTTTGTCGTCTAGGTCATTGGG
TTAAAAAAGGCACCGCGAACA
FMO10983.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| defl-RA | 3227 | CG18176-RA | 119..1190 | 8..1071 | 4990 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9723541..9724583 | 8..1043 | 4785 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:51:59 has no hits.
FMO10983.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:53 Download gff for
FMO10983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| defl-RA | 108..1199 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:00 Download gff for
FMO10983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| defl-RA | 112..1203 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:19 Download gff for
FMO10983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| defl-RA | 112..1203 | 1..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:19 Download gff for
FMO10983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9723534..9724636 | 1..1090 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:00 Download gff for
FMO10983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9716634..9717736 | 1..1090 | 97 | -> | Plus |
