FMO10986.5prime Sequence
1093 bp (983 high quality bases) assembled on 2011-11-18
> FMO10986.5prime
CAGTCGACATGTCCACGATAGACGCGCTCTACAATCGTCCTGGGCCCAAC
CGCCTGCGGCAGGCGGATGCCTATCGCACCACCAATCGTCAGGATGCCGT
CAAGATTCGTATGGCCAAGGATGGAATCGGCGCAGAGGAGCCCATCTCCG
TGCCCGGCCTGCTGAAGCGTACGGTCAACAATTACGGCGACTATCCTGCG
CTGCGCACCAAGAACGGCAAAAACGGATATCACACTGTCACCTACAAACA
ATATGAGCAGAAGGTGCACCAGGTGGCCAAGGCGTTCATTAAGCTCGGTC
TGGAGGAGCACCATTCGGTGGGTGTGCTGGCCTTCAATTGCGCCGAATGG
TTCTACTCGGCCATGGGCGCCATTCACGCACGAGGCATCATCGCCGGAAT
CTACACCACCAATTCCGCCGATGCAGTGCAGCACGTTCTGGAGAGCTCAC
ATGCCCAAATCGTGGTCGTCGACGACGCCAAGCAAATGGACAAGATTCAC
GCCATTCGCGACAAGCTGCCCAAGCTCAAGGCCGCCATTCAGATCCAGGA
GCCCTATTCCCCCTACTTGAAGAAGGAGGATGGCTACTACAGGTGGTCGG
AGATCGAGTCGATGAACGTTAGCGACGTGGAGGATCAGTACATGACCCGT
TTGGAGAATGTGGCGATCAACGAGTGCTGCTGCCTGGTCTACACCTCCGG
AACGGTGGGCATGCCCAAAGGCGTGATGCTCTCCCACGACAACATCACCT
TCGATGTGCGCGGCATCGTCAAGGCCATGGACCGTGTGGTGGTTGGGGCG
GAGTCGATCGTCTCCTACCTGCCACTTTCGCACGTGGCCGCCCAGACCGT
GGACATTTACACCTGCGCCTTTGTGGCGGGCTGCATTTGGGTTCGCCGAC
CAGATGCGCTGAAGGAAACGCTGGTGAAGTCGCTGCAGGATGCCCGACCC
ACGCCGATTCATGGGCGTGCCGCGTGGTGTACGAAAAGTTCCAGAGCGAT
GATCGCCGTGGCCATTTCAGCGCAGCCTGAGAAAATGCTCGCCAGCTGGG
CCAGGCCATCACGCTGAAGCACTACTGGGTGAGTTCAGGGCAG
FMO10986.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bgm-RC | 2464 | CG4501-RC | 143..1224 | 7..1084 | 4950 | 97.7 | Plus |
| bgm-RA | 2501 | CG4501-RA | 180..1261 | 7..1084 | 4950 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:52:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14016537..14017032 | 593..1084 | 1800 | 95.4 | Plus |
| 2L | 23513712 | 2L | 14016132..14016477 | 248..593 | 1730 | 100 | Plus |
| 2L | 23513712 | 2L | 14015794..14016034 | 7..247 | 1175 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:52:21 has no hits.
FMO10986.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:55 Download gff for
FMO10986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bgm-RA | 171..1266 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:14 Download gff for
FMO10986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bgm-RA | 173..1268 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:29 Download gff for
FMO10986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bgm-RA | 173..1268 | 1..1093 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:29 Download gff for
FMO10986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14016132..14016477 | 248..593 | 100 | -> | Plus |
| 2L | 14015787..14016034 | 1..247 | 97 | -> | Plus |
| 2L | 14016538..14017037 | 594..1090 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:14 Download gff for
FMO10986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14015787..14016034 | 1..247 | 97 | -> | Plus |
| arm_2L | 14016132..14016477 | 248..593 | 100 | -> | Plus |
| arm_2L | 14016538..14017037 | 594..1090 | 95 | | Plus |
