FMO10994.5prime Sequence
1060 bp (893 high quality bases) assembled on 2011-11-18
> FMO10994.5prime
CAGTCGACATGGAGTGTTTCAATGCGGAAATACCAGCTGACGGAGTGGTT
AATAGCATAGAGACCGAAGAGATTTCGGAAAATGTAGTGAAAGCTGATGA
AACCACGCTGGCAAATGGTGAGGATGAAGCCGGAAAAGCCGGCGAGGAAT
ATGCTTACTTGGAGCGAAATGAATTCACTTCGGAAATATTCAAAGTTGAA
GTGAAGAACATGGGATATTTCGGTATTGGGGAGTTTAAGAAGCTTTTGAG
AAACACCCTCAAATTTGACGTGACCAAAATCAAGGCTCCAACTCGAAAAG
AGTTCGCCTTTGTGTGCTTCCGCAGTCAGGAGGATCAACAAAGGGCCTTG
GAGATCCTGAATGGATACAAATGGAAGGTAAAGGTGTTGAAGGCTCATGT
TGCCAAGGCCTCGGCCGATCCTCTACAGAAAAAGCGAGCTGCCGAGGAAC
AGGAGTCGGAGAGAAAGCCCAAGAAACAACGTACGGCGGTGGAAGCCACG
TGTCCTCTGTCGCACATTGCCTACGACCAGCAGATTAAACAAAAATCCGA
GGAAATGTCGGCACTTCTGGCGAAATACACCCAGGAACTTCTGAAGGTCA
ATCCGCGGGCAAAGCCCCACTTGGATAAGTTCCAATTCCACGAGGTGCTT
CCCTCACCCACCGTTAATGGGTATAGAAATAAAAACGAGTTCACCGTAGA
AAGAACTCCGTAGCGAGTGGGTTGTGGGCTTCAGATTGGGCTGCTACAGC
GATGGATCTGTGGAAGTAGCCGAGGTCGCAGACTTGCCACATCTACCGGA
GCATGCCAAGTGGGCTGCTCGCAGTTTCAGGACTGGTGAGGAAGTCAAGT
CTGCCCTTCATCCGGACGGAATATTGGCAACTTCGGCAGCTATGATGCGT
GCTCAGTGCCACAGGTGACTATGCTGGTGGCGGGCAATACTCCTCGAACT
AAGTGAGACACAGTTGACTTAGCAAGACTGAAGTCCTCTCCAAAACTGGC
ATGATGCTCCGTTACAATGCACTCCTGATACGAATGTCACCTCTCGGAAC
AGGTTGCAAA
FMO10994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3808-RA | 2522 | CG3808-RA | 89..1121 | 9..1012 | 4295 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:52:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18999643..19000243 | 828..230 | 2800 | 98.5 | Minus |
| 3L | 28110227 | 3L | 19000298..19000520 | 231..9 | 1115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:52:58 has no hits.
FMO10994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:59:59 Download gff for
FMO10994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3808-RA | 83..1140 | 1..1030 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:34 Download gff for
FMO10994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3808-RA | 83..1140 | 1..1030 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:48 Download gff for
FMO10994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3808-RA | 83..1140 | 1..1030 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:48 Download gff for
FMO10994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19000299..19000525 | 1..230 | 98 | | Minus |
| 3L | 18999413..19000242 | 231..1030 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:34 Download gff for
FMO10994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18992513..18993342 | 231..1030 | 94 | <- | Minus |
| arm_3L | 18993399..18993625 | 1..230 | 98 | | Minus |
